RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 ZP3P21754 424 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 CD40LGP29965 261 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 ATP6V1E1P36543 226 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 TPPP2P59282 170 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 TMEM267Q0VDI3 215 aaPredicted RBP5.59□□□□□ -1.51
VPS4A-203ENST00000564399 RAB40BQ12829 278 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 LSAMPQ13449 338 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 PMS2P11Q13670 270 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 PTGES3Q15185 160 aaKnown RBP5.59□□□□□ -1.51
VPS4A-203ENST00000564399 LRRC36Q1X8D7 754 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 C5orf64Q2M2E5 130 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 TP53I3Q53FA7 332 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 AADACL4Q5VUY2 407 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 NXNL2Q5VZ03 156 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 SLC25A48Q6ZT89 311 aaKnown RBP5.59□□□□□ -1.51
VPS4A-203ENST00000564399 RPP25LQ8N5L8 163 aaKnown RBP5.59□□□□□ -1.51
VPS4A-203ENST00000564399 C8orf31Q8N9H6 132 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 SUMF2Q8NBJ7 301 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 OR13C3Q8NGS6 347 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 OR10AC1Q8NH08 325 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 NEK7Q8TDX7 302 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 GATAD1Q8WUU5 269 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 LRGUKQ96M69 825 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 IL4I1Q96RQ9 567 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 DPCDQ9BVM2 203 aaPredicted RBP5.59□□□□□ -1.51
VPS4A-203ENST00000564399 CST11Q9H112 138 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 PLEKHA3Q9HB20 300 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 GNG12Q9UBI6 72 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 TAGLN3Q9UI15 199 aa5.59□□□□□ -1.51
VPS4A-203ENST00000564399 TMEM30CPA0ZSE6 113 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 C15orf65H3BRN8 121 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 LANCL1O43813 399 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 OR7C1O76099 320 aaPredicted RBP5.58□□□□□ -1.52
VPS4A-203ENST00000564399 HTR3BO95264 441 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 CNIH1O95406 144 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 FAM107AO95990 144 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 VHLP40337 213 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 MS4A2Q01362 244 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 PAX5Q02548 391 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 TRIM25Q14258 630 aaKnown RBP5.58□□□□□ -1.52
VPS4A-203ENST00000564399 IL13RA2Q14627 380 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 PLGLAQ15195 96 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RSU1Q15404 277 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 KISS1Q15726 138 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 PIGYQ3MUY2 71 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ACTBL2Q562R1 376 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 CT45A1Q5HYN5 189 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF691Q5VV52 312 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 LPCAT4Q643R3 524 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ELP2Q6IA86 826 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 LCN12Q6JVE5 192 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 PYHIN1Q6K0P9 492 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 GID4Q8IVV7 300 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 TCTEX1D1Q8N7M0 179 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 OR10V1Q8NGI7 309 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 OR10K1Q8NGX5 313 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 OR2G2Q8NGZ5 317 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 CT45A3Q8NHU0 189 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 TMEM163Q8TC26 289 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RGP1Q92546 391 aaPredicted RBP5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RITA1Q96K30 269 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RHOVQ96L33 236 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 GPER1Q99527 375 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 NABP2Q9BQ15 211 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 FAM107BQ9H098 131 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RANGRFQ9HD47 186 aaPredicted RBP5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ARL8BQ9NVJ2 186 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 RNF150Q9ULK6 438 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 DHDHQ9UQ10 334 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 FBXO7Q9Y3I1 522 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
VPS4A-203ENST00000564399 ANKRD34BA5PLL1 514 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 NUPR2A6NF83 97 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 SPINT2O43291 252 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ORC5O43913 435 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 TPPPO94811 219 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 TRGV3P03979 118 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF134P52741 427 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF137PP52743 207 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 SYNJ2BPP57105 145 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 CD81P60033 236 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 CX3CL1P78423 397 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 NDPQ00604 133 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 Q3ZCU0 254 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ATAD3CQ5T2N8 411 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF660Q6AZW8 331 aaPredicted RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 PPP1R27Q86WC6 154 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 Q8N402 240 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 PRR18Q8N4B5 295 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF439Q8NDP4 499 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 PXT1Q8NFP0 134 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 OR51A4Q8NGJ6 313 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 OR9G4Q8NGQ1 327 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 TNFAIP8L1Q8WVP5 186 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 DNAJC9Q8WXX5 260 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 THAP7Q9BT49 309 aaPredicted RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 FAM192AQ9GZU8 254 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms