RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ARSBP15848 533 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 MGMTP16455 207 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 ECI1P42126 302 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 RBM11P57052 281 aaKnown RBP12.63□□□□□ -0.39
RNF40-205ENST00000563909 ERVFRD-1P60508 538 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 SCN1BQ07699 218 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 HES5Q5TA89 166 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 Q6P435 159 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 ASCC1Q8N9N2 400 aaKnown RBP12.63□□□□□ -0.39
RNF40-205ENST00000563909 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
RNF40-205ENST00000563909 hCG_1809904A0A1W2PP81 198 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 A0A1W2PPE2 198 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 A0A1W2PR64 198 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 A0A1W2PRV1 198 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 H3BUI4 141 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 SIRPB1O00241 398 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 ZNF737O75373 536 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 JTBO76095 146 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 GABARAPO95166 117 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 GABRR1P24046 479 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 LUMP51884 338 aaPredicted RBP12.62□□□□□ -0.39
RNF40-205ENST00000563909 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
RNF40-205ENST00000563909 MXD1Q05195 221 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 P2RY14Q15391 338 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 MPV17LQ2QL34 196 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 FAM3DQ96BQ1 224 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 SELENOIQ9C0D9 397 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 BANF2Q9H503 90 aa12.62□□□□□ -0.39
RNF40-205ENST00000563909 PLECQ15149 4684 aaKnown RBP12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM82A0PJX8 343 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SMIM30A4D0T7 59 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM14DPA8MWL7 114 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM127O75204 238 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 IL1AP01583 271 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 LPLP06858 475 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 MYCNOSP40205 109 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 CLDN12P56749 244 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 QRFPP83859 136 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 C2orf76Q3KRA6 126 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 C8orf86Q6ZUL3 223 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 NR2C2APQ86WQ0 139 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 CROCCP3Q8IVE0 287 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 OR8H2Q8N162 312 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM104Q8NE00 496 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 TMEM59Q9BXS4 323 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 IFT22Q9H7X7 185 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SPACA1Q9HBV2 294 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SMAD5-AS1Q9Y6J3 95 aa12.61□□□□□ -0.39
RNF40-205ENST00000563909 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 MGST3O14880 152 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 PSPNO60542 156 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 ARG1P05089 322 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 CCL3L1P16619 93 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 TGFBR1P36897 503 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 SERPINB10P48595 397 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 DYNLT3P51808 116 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 RAB25P57735 213 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 VBP1P61758 197 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 NCS1P62166 190 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 GRK1Q15835 563 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 OR10K2Q6IF99 312 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 ZNF782Q6ZMW2 699 aaPredicted RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 GDPD3Q7L5L3 318 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 CLVS1Q8IUQ0 354 aaPredicted RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 FAM46BQ96A09 425 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 Q96M66 194 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 P2RX4Q99571 388 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 URM1Q9BTM9 101 aaKnown RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 NAA50Q9GZZ1 169 aaKnown RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 RAB22AQ9UL26 194 aa12.6□□□□□ -0.39
RNF40-205ENST00000563909 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
RNF40-205ENST00000563909 FUOMA2VDF0 154 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 NUDT19A8MXV4 375 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 NOL3O60936 208 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms