RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 S1PR3Q99500 378 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 FAM192AQ9GZU8 254 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 IDI2-AS1Q9NZ38 188 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 SNX5Q9Y5X3 404 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 A0A087WW49 117 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 SLC31A2O15432 143 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 SAP30O75446 220 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 TFAP2AP05549 437 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 KRT8P05787 483 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 ZP1P60852 638 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 PAX5Q02548 391 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF85Q03923 595 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 SMN1Q16637 294 aaKnown RBP7.96□□□□□ -1.14
SF3B3-204ENST00000563739 HAGHQ16775 308 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 LTC4SQ16873 150 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 LHFPL2Q6ZUX7 228 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 C8orf59Q8N0T1 100 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-204ENST00000563739 OR5D18Q8NGL1 313 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 RFESDQ8TAC1 157 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 ARPC1AQ92747 370 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 NABP2Q9BQ15 211 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 AMBNQ9NP70 447 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 NDUFA13Q9P0J0 144 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 EXOGQ9Y2C4 368 aaKnown RBP7.96□□□□□ -1.14
SF3B3-204ENST00000563739 FBXO7Q9Y3I1 522 aa7.96□□□□□ -1.14
SF3B3-204ENST00000563739 RPL36Q9Y3U8 105 aaKnown RBP7.96□□□□□ -1.14
SF3B3-204ENST00000563739 AMMECR1Q9Y4X0 333 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-204ENST00000563739 A0A087WXM4 84 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RBMY1BA6NDE4 496 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RBMY1EA6NEQ0 496 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 C15orf65H3BRN8 121 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 SH2D1BO14796 132 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 SYT7O43581 403 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 GATBO75879 557 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 SULT1C4O75897 302 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 JTBO76095 146 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RPP14O95059 124 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RBMY1DP0C7P1 496 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 ATF1P18846 271 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RBP2P50120 134 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RAB40BQ12829 278 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 FAM27D1Q5T7N8 215 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 FAM220AQ7Z4H9 259 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF439Q8NDP4 499 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 FBLIM1Q8WUP2 373 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 RTN4IP1Q8WWV3 396 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 LINC00476Q8WZB0 136 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 NCOR1P1Q9H4R4 102 aa7.95□□□□□ -1.14
SF3B3-204ENST00000563739 MRPS18AQ9NVS2 196 aaKnown RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF107Q9UII5 783 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-204ENST00000563739 SMIM31A0A1B0GVY4 71 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 DAPL1A0PJW8 107 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 METTL15A6NJ78 407 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 NCBP2LA6PVI3 153 aaKnown RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 HSPB6O14558 160 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ATP6V0E1O15342 81 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 FADS2O95864 444 aaKnown RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 IGLV1-51P01701 117 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF44P15621 663 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 CNTFRP26992 372 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ALDH3B2P48448 385 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ATP1B3P54709 279 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 RBM48Q5RL73 367 aaKnown RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 C6orf141Q5SZD1 244 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 LAIR2Q6ISS4 152 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 LINC00322Q6ZN03 302 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 MOB3BQ86TA1 216 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 SATL1Q86VE3 508 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 LYPD6Q86Y78 171 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 LINC00311Q8N616 119 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ACBD7Q8N6N7 88 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 YIPF7Q8N8F6 280 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 MINDY2Q8NBR6 621 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 OR51A4Q8NGJ6 313 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 OR52I1Q8NGK6 324 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 OR2T10Q8NGZ9 312 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 UBALD1Q8TB05 177 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 PP6455Q8WZ26 134 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 RITA1Q96K30 269 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 ALG8Q9BVK2 526 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 JAM3Q9BX67 310 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 TOLLIPQ9H0E2 274 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 PLEKHA1Q9HB21 404 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 FGF20Q9NP95 211 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-204ENST00000563739 OR6C3Q9NZP0 311 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 GNG8Q9UK08 70 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 VSIG4Q9Y279 399 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 WSB1Q9Y6I7 421 aa7.94□□□□□ -1.14
SF3B3-204ENST00000563739 IGHV7-81A0A0B4J1V7 117 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 IRGMA1A4Y4 181 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 FUOMA2VDF0 154 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 CYB5AP00167 134 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 SLC2A2P11168 524 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-204ENST00000563739 VDAC1P21796 283 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 CD1BP29016 333 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms