RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-218	ENST00000563686	LSM10	Q969L4	123 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF488	Q96MN9	340 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	C1QTNF5	Q9BXJ0	243 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	TRGV10	A0A0A0MS01	117 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	OR2H2	O95918	312 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	GYPA	P02724	150 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ERVS71-1	P61550	626 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	NRN1L	Q496H8	165 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF383	Q8NA42	475 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	GPR146	Q96CH1	333 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SLX1A	Q9BQ83	275 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	TLNRD1	Q9H1K6	362 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC25A22	Q9H936	323 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	PLXND1	Q9Y4D7	1925 aa		4.93	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF320	A2RRD8	509 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HSBP1L1	C9JCN9	74 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	FCGR3B	O75015	233 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	LYZL6	O75951	148 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	CYB5R3	P00387	301 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	CD81	P60033	236 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	PMP22	Q01453	160 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	BATF	Q16520	125 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	MRGPRG	Q86SM5	289 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KDF1	Q8NAX2	398 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10D4P	Q8NGN7	298 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	MRGPRF	Q96AM1	343 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	TMEM18	Q96B42	140 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DAZAP1	Q96EP5	407 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	FAM103A1	Q9BTL3	118 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DYNLRB1	Q9NP97	96 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	PLSCR2	Q9NRY7	297 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC35D1	Q9NTN3	355 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DENND4A	Q7Z401	1863 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DENND4C	Q5VZ89	1909 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A0G2JMM0	328 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	LOC102723971	A0A1B0GUV8	181 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A1W2PPB8	328 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A1W2PRS3	328 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KIR3DP1	A8MWS1	328 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SOX15	O60248	233 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	UMOD	P07911	640 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KLK2	P20151	261 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	CTSS	P25774	331 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	MRPL14	Q6P1L8	145 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	INO80C	Q6PI98	192 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DNM1P46	Q6ZS02	220 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC35E3	Q7Z769	313 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10X1	Q8NGY0	326 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	DTD1	Q8TEA8	209 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	ANAPC10	Q9UM13	185 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	MSGN1	A6NI15	193 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	PATE3	B3GLJ2	98 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686		M0R1X1	148 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	BCL2	P10415	239 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	RPS16	P62249	146 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	FBXW9	Q5XUX1	488 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC25A40	Q8TBP6	338 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HIST1H2BA	Q96A08	127 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	POM121L2	Q96KW2	1035 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SMOC1	Q9H4F8	434 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HS3ST3B1	Q9Y662	390 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	LOC102723996	A0A087X1L8	192 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	TRAV20	A0A0B4J274	112 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	IGSF23	A1L1A6	192 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	MASP2	O00187	686 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SPRY3	O43610	288 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SYNGR1	O43759	233 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HIST1H3A	P68431	136 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	CFHR1	Q03591	330 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	ATRAID	Q6UW56	229 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	P2RX4	Q99571	388 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KLHDC3	Q9BQ90	382 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	OR1A1	Q9P1Q5	309 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KIAA1456	Q9P272	454 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SEMA5B	Q9P283	1151 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	KRAS	P01116	189 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	FOLR2	P14207	255 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	RBPJ	Q06330	500 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HES3	Q5TGS1	186 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	NABP1	Q96AH0	204 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	NEIL1	Q96FI4	390 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	HSD17B10	Q99714	261 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	USB1	Q9BQ65	265 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	PATZ1	Q9HBE1	687 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	WFDC1	Q9HC57	220 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	NGB	Q9NPG2	151 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	PRSS50	Q9UI38	385 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	SSUH2	Q9Y2M2	353 aa		4.92	□□□□□ -1.62
TCF4-218	ENST00000563686	IGKV1-9	A0A0C4DH69	117 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686		G3V3Q6	166 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	PDGFB	P01127	241 aa	Predicted RBP	4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	NDUFB7	P17568	137 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	ACP1	P24666	158 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	HIST3H3	Q16695	136 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF506	Q5JVG8	444 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	S100A7A	Q86SG5	101 aa		4.91	□□□□□ -1.62
TCF4-218	ENST00000563686	VASH2	Q86V25	355 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms