RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 F8VVB4 439 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 F8VWA3 439 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 TMEM178BH3BS89 294 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 H7C417 338 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 J3QRK9 145 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SIRPB1O00241 398 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 WNT9BO14905 357 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 ORC5O43913 435 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 UPK1BO75841 260 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 HAND1O96004 215 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 TOMM40O96008 361 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SOD3P08294 240 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 CSF1P09603 554 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 RNF224P0DH78 156 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 PSG2P11465 335 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 DAOP14920 347 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 HIST1H1DP16402 221 aaKnown RBP3.84□□□□□ -1.79
CDR2-203ENST00000563573 GNB3P16520 340 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 COL8A2P25067 703 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 CHATP28329 748 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 DUSP1P28562 367 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 RCVRNP35243 200 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 FAUP35544 74 aaKnown RBP3.84□□□□□ -1.79
CDR2-203ENST00000563573 KCNJ3P48549 501 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 EFNA4P52798 201 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 TMEM33P57088 247 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 MRPS11P82912 194 aaKnown RBP3.84□□□□□ -1.79
CDR2-203ENST00000563573 MADCAM1Q13477 382 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 ZNF79Q15937 498 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 MOGAT2Q3SYC2 334 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 PAN3Q58A45 887 aaKnown RBP3.84□□□□□ -1.79
CDR2-203ENST00000563573 C11orf71Q6IPW1 123 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SLC36A1Q7Z2H8 476 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 C6orf201Q7Z4U5 140 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 TRAPPC6BQ86SZ2 158 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 ZNF561Q8N587 486 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 GCSAMQ8N6F7 178 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SUMF2Q8NBJ7 301 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 DEFB108BQ8NET1 73 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 OR5T2Q8NGG2 359 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 OR52I2Q8NH67 350 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SETD6Q8TBK2 473 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 DEDD2Q8WXF8 326 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SEH1LQ96EE3 360 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 C14orf79Q96F83 325 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 CCL19Q99731 98 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 C7orf50Q9BRJ6 194 aaKnown RBP3.84□□□□□ -1.79
CDR2-203ENST00000563573 NICN1Q9BSH3 213 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 SRRQ9GZT4 340 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 DNTTIP1Q9H147 329 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 HIPK2Q9H2X6 1198 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 PLEKHF2Q9H8W4 249 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 HES4Q9HCC6 221 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.84□□□□□ -1.79
CDR2-203ENST00000563573 TMEM106BQ9NUM4 274 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 NLKQ9UBE8 527 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 MGAT4AQ9UM21 535 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 V9GYH0 126 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 ARFGEF3Q5TH69 2177 aa3.84□□□□□ -1.79
CDR2-203ENST00000563573 HECTD1Q9ULT8 2610 aa3.84□□□□□ -1.8
CDR2-203ENST00000563573 IGHV3OR15-7A0A075B7D8 119 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 TRAV24A0A0B4J272 114 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 MEIS3P1A6NDR6 274 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 TMEM235A6NFC5 223 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 NAP1L6A6NFF2 107 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 NKX6-3A6NJ46 265 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 FOXI3A8MTJ6 420 aaPredicted RBP3.83□□□□□ -1.8
CDR2-203ENST00000563573 DISC1C4P0D8 188 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 LGALS8O00214 317 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 SLC33A1O00400 549 aaPredicted RBP3.83□□□□□ -1.8
CDR2-203ENST00000563573 MFNGO00587 321 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 PPIHO43447 177 aaKnown RBP3.83□□□□□ -1.8
CDR2-203ENST00000563573 NDUFB3O43676 98 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 FSTL3O95633 263 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 OR2H2O95918 312 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 GYPAP02724 150 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 IFNA6P05013 189 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 CSF3P09919 207 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 AKAIN1P0CW23 69 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 IL7P13232 177 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 GZMHP20718 246 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 DTYMKP23919 212 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 DNASE1P24855 282 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 CD80P33681 288 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 CDKN1AP38936 164 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 GPR6P46095 362 aaPredicted RBP3.83□□□□□ -1.8
CDR2-203ENST00000563573 OR3A3P47888 321 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 PDLIM4P50479 330 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 TAS2R19P59542 299 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 ARPC4P59998 168 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 GRK1Q15835 563 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 CARTPTQ16568 116 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 BAK1Q16611 211 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 RGS21Q2M5E4 152 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 CHRFAM7AQ494W8 412 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 ACTBL2Q562R1 376 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 SPRNQ5BIV9 151 aa3.83□□□□□ -1.8
CDR2-203ENST00000563573 ATPAF1Q5TC12 328 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms