RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZNF35P13682 527 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 PRKACAP17612 351 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 CALCRP30988 508 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 ACVR1BP36896 505 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 IFNGR2P38484 337 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 IDH3GP51553 393 aaPredicted RBP3.63□□□□□ -1.83
LINC00254-201ENST00000563416 FMODQ06828 376 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 CD47Q08722 323 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 KRR1Q13601 381 aaKnown RBP3.63□□□□□ -1.83
LINC00254-201ENST00000563416 FLOT2Q14254 428 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 Q1RN00 199 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 GSG1Q2KHT4 349 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 RFX4Q33E94 735 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 NHLRC3Q5JS37 347 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 THEM4Q5T1C6 240 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 RSBN1Q5VWQ0 802 aaPredicted RBP3.63□□□□□ -1.83
LINC00254-201ENST00000563416 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 RPL13AP3Q6NVV1 102 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF544Q6NX49 715 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 SMARCD3Q6STE5 483 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF620Q6ZNG0 422 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 DPPA2Q7Z7J5 298 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 ERI1Q8IV48 349 aaKnown RBP3.63□□□□□ -1.83
LINC00254-201ENST00000563416 SKA3Q8IX90 412 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 SLC22A24Q8N4F4 322 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 KIR3DL3Q8N743 410 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 BBS1Q8NFJ9 593 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 RFESDQ8TAC1 157 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 FANK1Q8TC84 345 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 GNPDA2Q8TDQ7 276 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 GLYATL2Q8WU03 294 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 CANT1Q8WVQ1 401 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 DUS3LQ96G46 650 aaKnown RBP3.63□□□□□ -1.83
LINC00254-201ENST00000563416 Q96M85 177 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 CCL19Q99731 98 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 DHRS9Q9BPW9 319 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 C20orf24Q9BUV8 137 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 NDEL1Q9GZM8 345 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 OR52D1Q9H346 318 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 REEP1Q9H902 201 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 FAIMQ9NVQ4 179 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 IL20Q9NYY1 176 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 MLXQ9UH92 298 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 FBXL3Q9UKT7 428 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 POFUT2Q9Y2G5 429 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 DSCAML1Q8TD84 2053 aa3.63□□□□□ -1.83
LINC00254-201ENST00000563416 SETD2Q9BYW2 2564 aaPredicted RBP3.62□□□□□ -1.83
LINC00254-201ENST00000563416 NF1P21359 2839 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 WNK2Q9Y3S1 2297 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TRAV25A0A0B4J276 109 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 IGHV2OR16-5A0A0B4J2B6 119 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TEX48A0A1B0GUV7 120 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 PRSS37A4D1T9 235 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 H3BMQ9 156 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 H7C1C5 153 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 H7C417 338 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 BHLHE40O14503 412 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 FKBP6O75344 327 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 OR2F2O95006 317 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CCNB2O95067 398 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 FARS2O95363 451 aaKnown RBP3.62□□□□□ -1.83
LINC00254-201ENST00000563416 STAMBPO95630 424 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SNAP29O95721 258 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SERPINA5P05154 406 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 HCKP08631 526 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CST2P09228 141 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CTLA4P16410 223 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF32P17041 273 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 NPR2P20594 1047 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 GSTM3P21266 225 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 NUP62P37198 522 aaPredicted RBP3.62□□□□□ -1.83
LINC00254-201ENST00000563416 LCN6P62502 163 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 ERVK-25P63136 954 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 ENDOGQ14249 297 aaKnown RBP3.62□□□□□ -1.83
LINC00254-201ENST00000563416 MICAQ29983 383 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TIGITQ495A1 244 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SLC36A2Q495M3 483 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 FAM27BQ5VT28 67 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 MEDAGQ5VYS4 303 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 UQCC3Q6UW78 93 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 DNM1P46Q6ZS02 220 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 RASSF6Q6ZTQ3 369 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SLC16A14Q7RTX9 510 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TMEM179BQ7Z7N9 219 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SPATA24Q86W54 205 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 MUC15Q8N387 334 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF491Q8N8L2 437 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 OR4F15Q8NGB8 312 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 OR8D4Q8NGM9 314 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 OR1L6Q8NGR2 347 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TMEM80Q96HE8 168 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 C9orf85Q96MD7 179 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 RBP7Q96R05 134 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SH3GL3Q99963 347 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CHID1Q9BWS9 393 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms