RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 VN1R17PQ8TDU5 208 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 PECRQ9BY49 303 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 PBOV1Q9GZY1 135 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 CHTOPQ9Y3Y2 248 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 H3BML4 177 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 SLC6A8P48029 635 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 UBE2V1Q13404 147 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 Q6ZWC4 215 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 CISD2Q8N5K1 135 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 OR51E1Q8TCB6 317 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 LAMTOR5O43504 91 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 CBR3O75828 277 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 GCH1P30793 250 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 DPPA3Q6W0C5 159 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 MCTS1Q9ULC4 181 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-203ENST00000562609 TRAV36DV7A0A075B6V5 113 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 ANKUB1A6NFN9 424 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 CELA2AP08217 269 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 CCL4P13236 92 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 CDKN1AP38936 164 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 TLE1Q04724 770 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 MOB3AQ96BX8 217 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 HIPK2Q9H2X6 1198 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 OR51I2Q9H344 312 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 TMEM9BQ9NQ34 198 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 PHF1O43189 567 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 OR2J2O76002 312 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 HLA-HP01893 362 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 FMODQ06828 376 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM189A2Q15884 450 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 IMMP2LQ96T52 175 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 P2RX4Q99571 388 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 LYRM2Q9NU23 88 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-203ENST00000562609 COL5A1P20908 1838 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 IGLV3-12A0A075B6K2 115 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 A0A1W2PQD3 144 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 NKX2-6A6NCS4 301 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 M0QZ24 198 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 MTCP1P56278 107 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 TAS2R30P59541 319 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF154Q13106 437 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 PRDX4Q13162 271 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 KLHL24Q6TFL4 600 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 C6orf201Q7Z4U5 140 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 GCNT2Q8N0V5 402 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM89BQ8N5H3 189 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 OR11L1Q8NGX0 322 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 SLC2A9Q9NRM0 540 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 KLRF1Q9NZS2 232 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 PPBPP02775 128 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 C1QL2Q7Z5L3 287 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 OR10G3Q8NGC4 313 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 TXNIPQ9H3M7 391 aa12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF552Q9H707 407 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-203ENST00000562609 SERPINE3A8MV23 424 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 TMEM41BQ5BJD5 291 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 MANBALQ9NQG1 85 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 ANXA10Q9UJ72 324 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 TCN2P20062 427 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 CXorf66Q5JRM2 361 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 CENPVQ7Z7K6 275 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 ODF3L1Q8IXM7 274 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 RNF24Q9Y225 148 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 CPAMD8Q8IZJ3 1885 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 PRRC2CQ9Y520 2896 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 NPIPB7O75200 414 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms