RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 BUB1B-PAK6H3BSN5 160 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 J3QR06 171 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 PEX14O75381 377 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 TNFAIP8O95379 198 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 HBZP02008 142 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A15PP0C7V4 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A13PP0C7W8 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A14PP0C7W9 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A24PP0C7X0 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 CHATP28329 748 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 BRS3P32247 399 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 LSM3P62310 102 aaKnown RBP8.17□□□□□ -1.1
HERC1-212ENST00000561348 MRPS15P82914 257 aaKnown RBP8.17□□□□□ -1.1
HERC1-212ENST00000561348 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 HNF4GQ14541 408 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 C9orf152Q5JTZ5 239 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 Q6ZSV7 163 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 OR2W3Q7Z3T1 314 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 ARHGAP5-AS1Q96IT6 56 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 KCTD7Q96MP8 289 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 LPAR5Q9H1C0 372 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 MMP28Q9H239 520 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 RNF167Q9H6Y7 350 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 LIN7BQ9HAP6 207 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 TAF9BQ9HBM6 251 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 RAB18Q9NP72 206 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 RCC2Q9P258 522 aaKnown RBP8.17□□□□□ -1.1
HERC1-212ENST00000561348 DAPK2Q9UIK4 370 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 A0A0A6YYD4 124 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 IGHV3-72A0A0B4J1Y9 119 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 TRAV1-2A0A0B4J238 106 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 CLPSL1A2RUU4 121 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 ORC5O43913 435 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 CHST1O43916 411 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 CGB3P0DN86 165 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 CGB7P0DN87 165 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 VSIG10L2P0DP72 767 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 SDC2P34741 201 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 RANBP1P43487 201 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 MADCAM1Q13477 382 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 DIAPH2-AS1Q14236 149 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 OLFML2AQ68BL7 652 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 Q6ZTK2 550 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 C11orf44Q8N8P7 122 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 OR52L2PQ8NGH6 319 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 OR56B4Q8NH76 319 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 MRPL30Q8TCC3 161 aaKnown RBP8.16□□□□□ -1.1
HERC1-212ENST00000561348 CREB3L1Q96BA8 519 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 HDHD3Q9BSH5 251 aaPredicted RBP8.16□□□□□ -1.1
HERC1-212ENST00000561348 NPFFR1Q9GZQ6 430 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 NCOR1P1Q9H4R4 102 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 RAB9BQ9NP90 201 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 ABRACLQ9P1F3 81 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 PITPNC1Q9UKF7 332 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 RAB22AQ9UL26 194 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 TCF19Q9Y242 345 aa8.16□□□□□ -1.1
HERC1-212ENST00000561348 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 C15orf65H3BRN8 121 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 HSPA12AO43301 675 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CA11O75493 328 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CD3GP09693 182 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CLEC2LP0C7M8 214 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CD34P28906 385 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 PPP1CCP36873 323 aaKnown RBP8.15□□□□□ -1.1
HERC1-212ENST00000561348 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
HERC1-212ENST00000561348 EFNB2P52799 333 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 QRFPP83859 136 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 HABP2Q14520 560 aaPredicted RBP8.15□□□□□ -1.1
HERC1-212ENST00000561348 GNMTQ14749 295 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 IDNKQ5T6J7 187 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CD200R1LQ6Q8B3 271 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CCBE1Q6UXH8 406 aaPredicted RBP8.15□□□□□ -1.1
HERC1-212ENST00000561348 LYG1Q8N1E2 194 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 DRAM1Q8N682 238 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 OR56B1Q8NGI3 324 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 OR2T6Q8NHC8 308 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 LINC01006Q8NI28 216 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 PIFOQ8TCI5 191 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 CMSS1Q9BQ75 279 aaKnown RBP8.15□□□□□ -1.1
HERC1-212ENST00000561348 CENPOQ9BU64 300 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 TM2D1Q9BX74 207 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 PECRQ9BY49 303 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 GFOD1Q9NXC2 390 aa8.15□□□□□ -1.1
HERC1-212ENST00000561348 TENM1Q9UKZ4 2725 aa8.14□□□□□ -1.11
HERC1-212ENST00000561348 A0A1B0GUS0 222 aa8.14□□□□□ -1.11
HERC1-212ENST00000561348 METTL21EPA6NDL7 271 aa8.14□□□□□ -1.11
HERC1-212ENST00000561348 A6NDX4 124 aa8.14□□□□□ -1.11
HERC1-212ENST00000561348 SH2D7A6NKC9 451 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms