RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 KISS1Q15726 138 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ACSM3Q53FZ2 586 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 AVPI1Q5T686 147 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 STUMQ69YW2 141 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 HAGHLQ6PII5 290 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L9Q6RFH8 374 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 NR2C2APQ86WQ0 139 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ANGPTL5Q86XS5 388 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF573Q86YE8 665 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 MAPK1IP1LQ8NDC0 245 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 OR5D14Q8NGL3 314 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 OR13A1Q8NGR1 328 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 OR8S1Q8NH09 359 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ANGPTL6Q8NI99 470 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 NPRL2Q8WTW4 380 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 LRRC29Q8WV35 223 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PHYHIPQ92561 330 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM203Q969S6 136 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 YIPF6Q96EC8 236 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF488Q96MN9 340 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 SPACA5Q96QH8 159 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 NKX3-1Q99801 234 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM246Q9BRR3 403 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 TMED9Q9BVK6 235 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DPAGT1Q9H3H5 408 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 FN3KRPQ9HA64 309 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PLEKHA1Q9HB21 404 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM138Q9NPI0 162 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 KAAG1Q9UBP8 84 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 CTSZQ9UBR2 303 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4Q9UBX2 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 FOXJ3Q9UPW0 622 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 A8MXK9 166 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 CCRL2O00421 344 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 PPIHO43447 177 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 TFF1P04155 84 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 CD2P06729 351 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 SFTPBP07988 381 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 WNT2P09544 360 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 HSMCR30P0CW71 290 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 MUC1P15941 1255 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 RAB3AP20336 220 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 PSMA1P25786 263 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 PSMB9P28065 219 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 FGF9P31371 208 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 CD80P33681 288 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 MDH2P40926 338 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 NPBWR2P48146 333 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 RBP2P50120 134 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 MTCP1P56278 107 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 MZT1Q08AG7 82 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 NEDD8Q15843 81 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 C1orf100Q5SVJ3 147 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 ELP2Q6IA86 826 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 LYPD2Q6UXB3 125 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 ACP7Q6ZNF0 438 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 SLC25A26Q70HW3 274 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 CEACAM19Q7Z692 300 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 CDH26Q8IXH8 852 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 SAXO1Q8IYX7 474 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 ZSCAN4Q8NAM6 433 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 C19orf18Q8NEA5 215 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 PXT1Q8NFP0 134 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 DMBX1Q8NFW5 382 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 OR4D6Q8NGJ1 314 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 OR13F1Q8NGS4 319 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 TRMT10AQ8TBZ6 339 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 TSEN15Q8WW01 171 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 THRSPQ92748 146 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 C12orf43Q96C57 262 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 SDSLQ96GA7 329 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 PATZ1Q9HBE1 687 aaKnown RBP4.88□□□□□ -1.63
LRRC28-220ENST00000561253 SLC7A11Q9UPY5 501 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 MAB21L2Q9Y586 359 aa4.88□□□□□ -1.63
LRRC28-220ENST00000561253 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
LRRC28-220ENST00000561253 DOCK11Q5JSL3 2073 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 TENM1Q9UKZ4 2725 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PPIAL4EA0A075B759 164 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 TRAV1-2A0A0B4J238 106 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 FAM230AA0A1W2PPH8 454 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 LRRC30A6NM36 301 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PPIAL4DF5H284 164 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SLC22A1O15245 554 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SPRY1O43609 319 aaPredicted RBP4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ANGPTL7O43827 346 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF737O75373 536 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SERPINA3P01011 423 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PPIAL4FP0DN26 164 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PSG2P11465 335 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SRMP19623 302 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 GADD45AP24522 165 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 MAPK3P27361 379 aaPredicted RBP4.87□□□□□ -1.63
LRRC28-220ENST00000561253 MC5RP33032 325 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PTGFRP43088 359 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms