RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 MT-ND4P03905 459 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 IGFBP3P17936 291 aaPredicted RBP21.27■■□□□ 1
SNRPA1-215ENST00000561187 IL3RAP26951 378 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 EBI3Q14213 229 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 STX19Q8N4C7 294 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 Q8N6K4 173 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 OR14A2Q96R54 314 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 BANF2Q9H503 90 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 TRAPPC2LQ9UL33 140 aa21.27■■□□□ 1
SNRPA1-215ENST00000561187 TRBV5-5A0A0J9YX44 114 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 LRRC36Q1X8D7 754 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 SYT6Q5T7P8 510 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 GLIPR1L1Q6UWM5 242 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 C10orf67Q8IYJ2 551 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 LINC00311Q8N616 119 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 COMMD1Q8N668 190 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 OR52M1Q8NGK5 317 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 OR1L1Q8NH94 360 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 TFAP2CQ92754 450 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 HSPB9Q9BQS6 159 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 ABCG5Q9H222 651 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 LIN7CQ9NUP9 197 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 ETAA1Q9NY74 926 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 CKLFQ9UBR5 152 aa21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 DIMT1Q9UNQ2 313 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 EXOSC1Q9Y3B2 195 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-215ENST00000561187 ORC5O43913 435 aa21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 ZNF780AO75290 641 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 VHLP40337 213 aa21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 LUMP51884 338 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 AWAT2Q6E213 333 aa21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 TEX38Q6PEX7 206 aa21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 TMEM104Q8NE00 496 aa21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 MCRIP2Q9BUT9 160 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-215ENST00000561187 MCRIP1C9JLW8 97 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 CCL24O00175 119 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 MOSP00540 346 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 MAS1P04201 325 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 MYF6P23409 242 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 RPS11P62280 158 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 GPR50Q13585 617 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 Q499Y3 187 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 CXorf66Q5JRM2 361 aaPredicted RBP21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 DMKNQ6E0U4 476 aaPredicted RBP21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 RAB12Q6IQ22 244 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 C5orf24Q7Z6I8 188 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 ST6GALNAC6Q969X2 333 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 PGLYRP3Q96LB9 341 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 S1PR3Q99500 378 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 RASL11BQ9BPW5 248 aa21.24■□□□□ 0.99
SNRPA1-215ENST00000561187 HBZP02008 142 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 SLC2A2P11168 524 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 ZNF134P52741 427 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 F2RL1P55085 397 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 PNLIPRP3Q17RR3 467 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 ZNF439Q8NDP4 499 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 TMEM80Q96HE8 168 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 DCLRE1BQ9H816 532 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 PLSCR3Q9NRY6 295 aa21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 CHCHD3Q9NX63 227 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 RCC2Q9P258 522 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-215ENST00000561187 IRGMA1A4Y4 181 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 SPINT2O43291 252 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 RCC1P18754 421 aaPredicted RBP21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 CD1BP29016 333 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 UNQ9370/PRO34162Q6UXP9 181 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 SLC25A48Q6ZT89 311 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 SELENOIQ9C0D9 397 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 PEX16Q9Y5Y5 336 aa21.22■□□□□ 0.99
SNRPA1-215ENST00000561187 UBE2QL1A1L167 161 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 H0YHG0 523 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 CRTAPO75718 401 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 FSTP19883 344 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 SLC6A1P30531 599 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 ADARB1P78563 741 aaKnown RBP21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 GNMTQ14749 295 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 YIF1BQ5BJH7 314 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 CT45A1Q5HYN5 189 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 C8orf31Q8N9H6 132 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 CT45A3Q8NHU0 189 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 FAM46BQ96A09 425 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 B9D2Q9BPU9 175 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 SPACA1Q9HBV2 294 aa21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNRPA1-215ENST00000561187 RRP9O43818 475 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 VSIG8P0DPA2 414 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 DGCR2P98153 550 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 GPR176Q14439 515 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 C6orf183Q5T699 404 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 RDH12Q96NR8 316 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 PRR25Q96S07 402 aa21.2■□□□□ 0.98
SNRPA1-215ENST00000561187 TRBV5-7A0A0A0MS05 114 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 MGMTP16455 207 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 VDAC1P21796 283 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 SOX6P35712 828 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 MED21Q13503 144 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 DOC2BQ14184 412 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 FAM71E2Q8N5Q1 922 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 OR52L2PQ8NGH6 319 aa21.19■□□□□ 0.98
SNRPA1-215ENST00000561187 OR8U1Q8NH10 309 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms