RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C12orf77C9JDV5 145 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 M0QZ24 198 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 CCRL2O00421 344 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 SLC17A2O00624 439 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 PDCD5O14737 125 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 MRPS14O60783 128 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 GLAP06280 429 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 RCC1P18754 421 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 BLVRBP30043 206 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 PSMD7P51665 324 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 CLDN12P56749 244 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 KRTAP10-3P60369 221 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 HES1Q14469 280 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 SSX1Q16384 188 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 SIGIRRQ6IA17 410 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 C11orf88Q6PI97 169 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 TRAT1Q6PIZ9 186 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 SLC16A12Q6ZSM3 486 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 C6orf201Q7Z4U5 140 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 KLHDC1Q8N7A1 406 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 C11orf44Q8N8P7 122 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 SETD6Q8TBK2 473 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 NICN1Q9BSH3 213 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 URM1Q9BTM9 101 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 YTHDF1Q9BYJ9 559 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 ZNF696Q9H7X3 374 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 PLEKHJ1Q9NW61 149 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 NDUFB11Q9NX14 153 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 V9GY05 133 aa10.42□□□□□ -0.74
CTDSPL2-209ENST00000560620 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 HBZP02008 142 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 IL3RAP26951 378 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 RANBP1P43487 201 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 EFNB2P52799 333 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 UNC119Q13432 240 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 HES5Q5TA89 166 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 TREML4Q6UXN2 200 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 SPARTQ8N0X7 666 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR51D1Q8NGF3 324 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR10V1Q8NGI7 309 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR52M1Q8NGK5 317 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR56B4Q8NH76 319 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR1L1Q8NH94 360 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 FCGR1BQ92637 280 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 GFI1Q99684 422 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 SULT4A1Q9BR01 284 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 TAF9BQ9HBM6 251 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 LRRC42Q9Y546 428 aa10.41□□□□□ -0.74
CTDSPL2-209ENST00000560620 TMEM14DPA8MWL7 114 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 HSD17B6O14756 317 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 CHATP28329 748 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 REG1BP48304 166 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 RAB7AP51149 207 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 BLCAPP62952 87 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 C9orf152Q5JTZ5 239 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 C22orf42Q6IC83 251 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM53AQ6NSI3 398 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR2W3Q7Z3T1 314 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 DRAM1Q8N682 238 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM3DQ96BQ1 224 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 CYYR1Q96J86 154 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 LIN7BQ9HAP6 207 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR2S2Q9NQN1 319 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 ABRACLQ9P1F3 81 aa10.4□□□□□ -0.74
CTDSPL2-209ENST00000560620 SOCS1O15524 211 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 GAPDHP04406 335 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 LPLP06858 475 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 SNRNP70P08621 437 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 TMEM11P17152 192 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 RAB3BP20337 219 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 VEGFCP49767 419 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 LOXL3P58215 753 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 DIAPH2-AS1Q14236 149 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 HNF4GQ14541 408 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 HERPUD1Q15011 391 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 C2orf76Q3KRA6 126 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 ABCA11PQ4W5N1 156 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 UBE2UQ5VVX9 321 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 ZNF773Q6PK81 442 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 C16orf82Q7Z2V1 217 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR8H3Q8N146 312 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 MRPL30Q8TCC3 161 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 IL1F10Q8WWZ1 152 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 RBM14Q96PK6 669 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 TM2D1Q9BX74 207 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 LPAR5Q9H1C0 372 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 STEAP1Q9UHE8 339 aa10.39□□□□□ -0.75
CTDSPL2-209ENST00000560620 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 TRAV1-2A0A0B4J238 106 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms