RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 LGALS4P56470 323 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 SCAND1P57086 179 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 FAM189A2Q15884 450 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 Q6YL49 198 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
LYSMD2-204ENST00000560491 A0A0A6YYJ9 748 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 SDCBPO00560 298 aaPredicted RBP12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 HBZP02008 142 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 GNG10P50151 68 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 SLC9A3R2Q15599 337 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF880Q6PDB4 577 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 TRAT1Q6PIZ9 186 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 DYNAPQ8N1N2 210 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 OR4P4Q8NGL7 312 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 JMJD8Q96S16 334 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 KCNIP1Q9NZI2 227 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 ELF5Q9UKW6 265 aaPredicted RBP12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 SPATA2Q9UM82 520 aa12.58□□□□□ -0.4
LYSMD2-204ENST00000560491 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 F2RL2O00254 374 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 TOR1AO14656 332 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 SPINT2O43291 252 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 TMEM127O75204 238 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 IGHV4-59P01825 116 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 CD3GP09693 182 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 LOXL3P58215 753 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 SPCS2Q15005 226 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 HMGN3Q15651 99 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 PLA1AQ53H76 456 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 BEND2Q8NDZ0 799 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 RAB2BQ8WUD1 216 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 GFOD1Q9NXC2 390 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 PSG11Q9UQ72 335 aa12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 TBL2Q9Y4P3 447 aaKnown RBP12.57□□□□□ -0.4
LYSMD2-204ENST00000560491 TRBV6-6A0A0A6YYG2 114 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 TMBIM6P55061 237 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 GNMTQ14749 295 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 SSX2Q16385 188 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 HLA-DRB5Q30154 266 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 CDNFQ49AH0 187 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 MOB1BQ7L9L4 216 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 IZUMO1Q8IYV9 350 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 OR52M1Q8NGK5 317 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF596Q8TC21 504 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 Q9N2K0 584 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
LYSMD2-204ENST00000560491 FBN1P35555 2871 aaKnown RBP12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 TMEM235A6NFC5 223 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 J3QR06 171 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 SCGNO76038 276 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 HTR1DP28221 377 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 IER3P46695 156 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 RORCP51449 518 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 HLA-DRB3P79483 266 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 ARFRP1Q13795 201 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 UBE2NLQ5JXB2 153 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 OR52L2PQ8NGH6 319 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 ISOC1Q96CN7 298 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 MMP28Q9H239 520 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 COMMD3Q9UBI1 195 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 GNG12Q9UBI6 72 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
LYSMD2-204ENST00000560491 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 H3BMQ9 156 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 TRIM77I1YAP6 450 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 SLC31A2O15432 143 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 NOL3O60936 208 aaKnown RBP12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 FCGR3AP08637 254 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 PRRX1P54821 245 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 NUDCD2Q8WVJ2 157 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 SSMEM1Q8WWF3 244 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 IL1F10Q8WWZ1 152 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 PHF21AQ96BD5 680 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms