RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 A6NJY4 79 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 H0YHG0 523 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 AIPO00170 330 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 CCL24O00175 119 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 AP4M1O00189 453 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 OGG1O15527 345 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 IGFBP3P17936 291 aaPredicted RBP9.13□□□□□ -0.95
USP3-214ENST00000559718 ZNF134P52741 427 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 RIPK1Q13546 671 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 MPV17LQ2QL34 196 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 TEX38Q6PEX7 206 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 TGIF2LXQ8IUE1 241 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 PQLC1Q8N2U9 271 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 COMMD1Q8N668 190 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 ZFP41Q8N8Y5 198 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 OR52M1Q8NGK5 317 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 OR2T10Q8NGZ9 312 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 NEK7Q8TDX7 302 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 TFAP2CQ92754 450 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 SMIM19Q96E16 107 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 S100A13Q99584 98 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 B9D2Q9BPU9 175 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 HSPB9Q9BQS6 159 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
USP3-214ENST00000559718 GPR61Q9BZJ8 451 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 DCLRE1BQ9H816 532 aa9.13□□□□□ -0.95
USP3-214ENST00000559718 LIN7CQ9NUP9 197 aaKnown RBP9.13□□□□□ -0.95
USP3-214ENST00000559718 TRBV5-5A0A0J9YX44 114 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 A0A1W2PPK0 400 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 C12orf77C9JDV5 145 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 ORC5O43913 435 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 MOSP00540 346 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 GTF2F2P13984 249 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 DCKP27707 260 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 SLC6A1P30531 599 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 LUMP51884 338 aaPredicted RBP9.12□□□□□ -0.95
USP3-214ENST00000559718 F2RL1P55085 397 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 RPS11P62280 158 aaKnown RBP eCLIP9.12□□□□□ -0.95
USP3-214ENST00000559718 PNLIPRP3Q17RR3 467 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 SYT6Q5T7P8 510 aaPredicted RBP9.12□□□□□ -0.95
USP3-214ENST00000559718 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
USP3-214ENST00000559718 TMPRSS11AQ6ZMR5 421 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 LINC00596Q86U02 117 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 C8orf31Q8N9H6 132 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 ZNF439Q8NDP4 499 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 OR10V1Q8NGI7 309 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 OR4K15Q8NH41 348 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 GHSRQ92847 366 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 MUL1Q969V5 352 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 S1PR3Q99500 378 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
USP3-214ENST00000559718 BABAM2Q9NXR7 383 aa9.12□□□□□ -0.95
USP3-214ENST00000559718 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 CD1BP29016 333 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 VHLP40337 213 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 DGCR2P98153 550 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 CFHR3Q02985 330 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 GPR50Q13585 617 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 CT45A1Q5HYN5 189 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 GLIPR1L1Q6UWM5 242 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 PRR18Q8N4B5 295 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 STX19Q8N4C7 294 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 CT45A3Q8NHU0 189 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 PGLYRP3Q96LB9 341 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 OR14A2Q96R54 314 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 RASL11BQ9BPW5 248 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 BANF2Q9H503 90 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP3-214ENST00000559718 SMPD3Q9NY59 655 aaPredicted RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 RCC2Q9P258 522 aaKnown RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 TRAPPC2LQ9UL33 140 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
USP3-214ENST00000559718 NBEAL2Q6ZNJ1 2754 aa9.11□□□□□ -0.95
USP3-214ENST00000559718 TRBV5-7A0A0A0MS05 114 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 PNMA8CA0A1B0GUJ8 204 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 MCRIP1C9JLW8 97 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 GPX5O75715 221 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 BAG2O95816 211 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 HBZP02008 142 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 RCC1P18754 421 aaPredicted RBP9.1□□□□□ -0.95
USP3-214ENST00000559718 MYL12AP19105 171 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 IL3RAP26951 378 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 ZNF137PP52743 207 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 ADARB1P78563 741 aaKnown RBP9.1□□□□□ -0.95
USP3-214ENST00000559718 FOXE3Q13461 319 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 DOC2BQ14184 412 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 GNMTQ14749 295 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 Q499Y3 187 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 RAB12Q6IQ22 244 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 JAGN1Q8N5M9 183 aa9.1□□□□□ -0.95
USP3-214ENST00000559718 FAM71E2Q8N5Q1 922 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms