RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TBCEQ15813 527 aaPredicted RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 TRAT1Q6PIZ9 186 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 ZNF367Q7RTV3 350 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 C16orf82Q7Z2V1 217 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 LYPD6Q86Y78 171 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 OR10V1Q8NGI7 309 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 OR6M1Q8NGM8 313 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 OR56B4Q8NH76 319 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 KCNG3Q8TAE7 436 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 FAM110DQ8TAY7 271 aaPredicted RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 MMP27Q9H306 513 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 LIN7BQ9HAP6 207 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 CHMP1AQ9HD42 196 aaPredicted RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 ISYNA1Q9NPH2 558 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 KCNIP1Q9NZI2 227 aa6.57□□□□□ -1.36
SNX1-207ENST00000559401 AK6Q9Y3D8 172 aaKnown RBP6.57□□□□□ -1.36
SNX1-207ENST00000559401 SH2D7A6NKC9 451 aaPredicted RBP6.56□□□□□ -1.36
SNX1-207ENST00000559401 LY6LH3BQJ8 138 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 C15orf65H3BRN8 121 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 CCRL2O00421 344 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 CA11O75493 328 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SC5DO75845 299 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 OR2F2O95006 317 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 BPNT1O95861 308 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 HBZP02008 142 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 LPLP06858 475 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 FAM106CPP0CH98 169 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 VSIG8P0DPA2 414 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 CPEP16870 476 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 TMEM11P17152 192 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 RCC1P18754 421 aaPredicted RBP6.56□□□□□ -1.36
SNX1-207ENST00000559401 RPS27AP62979 156 aaKnown RBP6.56□□□□□ -1.36
SNX1-207ENST00000559401 FABP5Q01469 135 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 DIAPH2-AS1Q14236 149 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 HNF4GQ14541 408 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 RAB11BQ15907 218 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 NSUN5P1Q3KNT7 163 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 ABCA11PQ4W5N1 156 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 C1orf100Q5SVJ3 147 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SIGIRRQ6IA17 410 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 FAM53AQ6NSI3 398 aaPredicted RBP6.56□□□□□ -1.36
SNX1-207ENST00000559401 TMEM91Q6ZNR0 172 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SLC16A12Q6ZSM3 486 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 C6orf201Q7Z4U5 140 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 MOB3BQ86TA1 216 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 LYG1Q8N1E2 194 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SVOPQ8N4V2 548 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 DRAM1Q8N682 238 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 OR1L1Q8NH94 360 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SETD6Q8TBK2 473 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 CYYR1Q96J86 154 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 RBM14Q96PK6 669 aaKnown RBP6.56□□□□□ -1.36
SNX1-207ENST00000559401 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 LINC00574Q9H8X3 128 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 ACOT13Q9NPJ3 140 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 GFOD1Q9NXC2 390 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 MOB4Q9Y3A3 225 aa6.56□□□□□ -1.36
SNX1-207ENST00000559401 MGAM2Q2M2H8 2515 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 IGHV3-72A0A0B4J1Y9 119 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 A0A1W2PPI3 338 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 SLC22A1O15245 554 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 GAPDHP04406 335 aaKnown RBP6.55□□□□□ -1.36
SNX1-207ENST00000559401 GLAP06280 429 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 ARSBP15848 533 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 MYL9P24844 172 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 PSMB9P28065 219 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 CHATP28329 748 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 BLVRBP30043 206 aaPredicted RBP6.55□□□□□ -1.36
SNX1-207ENST00000559401 CLDN12P56749 244 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 GABARAPL2P60520 117 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 UNC119Q13432 240 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 TMEM30BQ3MIR4 351 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 FBLN7Q53RD9 439 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 HES5Q5TA89 166 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 Q6ZS46 218 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 OR8H3Q8N146 312 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 OR52M1Q8NGK5 317 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 SULT4A1Q9BR01 284 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 URM1Q9BTM9 101 aaKnown RBP6.55□□□□□ -1.36
SNX1-207ENST00000559401 FAAP24Q9BTP7 215 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 TAF9BQ9HBM6 251 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 OR2S2Q9NQN1 319 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 ABRACLQ9P1F3 81 aa6.55□□□□□ -1.36
SNX1-207ENST00000559401 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 A0A1W2PRX2 142 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 M0QZK8 103 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 SLC17A2O00624 439 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 PDCD5O14737 125 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 SLC31A2O15432 143 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 CD28P10747 220 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 PPP1CCP36873 323 aaKnown RBP6.54□□□□□ -1.36
SNX1-207ENST00000559401 RANBP1P43487 201 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 LOXL3P58215 753 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 EMX1Q04741 257 aaPredicted RBP6.54□□□□□ -1.36
SNX1-207ENST00000559401 GNMTQ14749 295 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms