RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-213ENST00000559399 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 ZNF695Q8IW36 515 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 JAGN1Q8N5M9 183 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 Q8N9W7 124 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 TMEM104Q8NE00 496 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 CYGBQ8WWM9 190 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 MUL1Q969V5 352 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 MRPS24Q96EL2 167 aaKnown RBP11.77□□□□□ -0.53
LRRC28-213ENST00000559399 TMEM80Q96HE8 168 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 P2RX4Q99571 388 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 MRPS28Q9Y2Q9 187 aaKnown RBP11.77□□□□□ -0.53
LRRC28-213ENST00000559399 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 MCRIP1C9JLW8 97 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 SPINT2O43291 252 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 TXNL1O43396 289 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 MOSP00540 346 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 CD1BP29016 333 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
LRRC28-213ENST00000559399 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 RAB12Q6IQ22 244 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 GLIPR1L1Q6UWM5 242 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 ZFP41Q8N8Y5 198 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 OR8H1Q8NGG4 311 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 PGLYRP3Q96LB9 341 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 OR14A2Q96R54 314 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 ETAA1Q9NY74 926 aa11.76□□□□□ -0.53
LRRC28-213ENST00000559399 TRBV5-7A0A0A0MS05 114 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 SLC31A2O15432 143 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 RRP9O43818 475 aaKnown RBP11.75□□□□□ -0.53
LRRC28-213ENST00000559399 ZNF137PP52743 207 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 TAS2R43P59537 309 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 PNLIPRP3Q17RR3 467 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 SYT6Q5T7P8 510 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-213ENST00000559399 TTC23Q5W5X9 447 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 AWAT2Q6E213 333 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 SLC25A48Q6ZT89 311 aaKnown RBP11.75□□□□□ -0.53
LRRC28-213ENST00000559399 PRR18Q8N4B5 295 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 ZNF485Q8NCK3 441 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 OR10V1Q8NGI7 309 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 OR4K15Q8NH41 348 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 RASL11BQ9BPW5 248 aa11.75□□□□□ -0.53
LRRC28-213ENST00000559399 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
LRRC28-213ENST00000559399 A0A1W2PPK0 400 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-213ENST00000559399 H0YHG0 523 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 EBAG9O00559 213 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 CA11O75493 328 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 HBZP02008 142 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 RAB25P57735 213 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 CD69Q07108 199 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 DCTN2Q13561 401 aaKnown RBP11.74□□□□□ -0.53
LRRC28-213ENST00000559399 GPR50Q13585 617 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-213ENST00000559399 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 TRAT1Q6PIZ9 186 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 UNQ9370/PRO34162Q6UXP9 181 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 CDH26Q8IXH8 852 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 GAPTQ8N292 157 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 S1PR3Q99500 378 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 C8orf4Q9NR00 106 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 PLSCR3Q9NRY6 295 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 PEX16Q9Y5Y5 336 aa11.74□□□□□ -0.53
LRRC28-213ENST00000559399 PNMA8CA0A1B0GUJ8 204 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 FAM90A10PA6NDY2 464 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 FAM90A7PA6NKC0 464 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 FAM90A23PA8MXZ1 464 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 CCL24O00175 119 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 MAS1P04201 325 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
LRRC28-213ENST00000559399 MGMTP16455 207 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 CAPGP40121 348 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 GP2P55259 537 aaKnown RBP11.73□□□□□ -0.53
LRRC28-213ENST00000559399 ST3GAL4Q11206 333 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 FOXE3Q13461 319 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 STEAP3Q658P3 488 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 PACRGLQ8N7B6 248 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 NKAIN3Q8N8D7 197 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 OR1L1Q8NH94 360 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 DERL3Q96Q80 235 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 SELENOIQ9C0D9 397 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 BANF2Q9H503 90 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 DCLRE1BQ9H816 532 aa11.73□□□□□ -0.53
LRRC28-213ENST00000559399 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms