RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 IRF3Q14653 427 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 C6orf141Q5SZD1 244 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 ZNF439Q8NDP4 499 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 UBALD1Q8TB05 177 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 CCDC107Q8WV48 283 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 NRG4Q8WWG1 115 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 SGCDQ92629 289 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 ETAA1Q9NY74 926 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 GHRLQ9UBU3 117 aa13.5□□□□□ -0.25
LRRC28-210ENST00000558879 IGHV3-43A0A0B4J1X8 118 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 IGHV1-3A0A0C4DH29 117 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 CA11O75493 328 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 GLAP06280 429 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 IGHV3-43DP0DP04 118 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 TMEM11P17152 192 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
LRRC28-210ENST00000558879 GPR50Q13585 617 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 SYT6Q5T7P8 510 aaPredicted RBP13.49□□□□□ -0.25
LRRC28-210ENST00000558879 SLC25A48Q6ZT89 311 aaKnown RBP13.49□□□□□ -0.25
LRRC28-210ENST00000558879 LRRTM1Q86UE6 522 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 Q8N6K4 173 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 OR4X2Q8NGF9 303 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 PHYHIPQ92561 330 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 MYDGFQ969H8 173 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 SELENOIQ9C0D9 397 aa13.49□□□□□ -0.25
LRRC28-210ENST00000558879 MBNL3Q9NUK0 354 aaKnown RBP13.49□□□□□ -0.25
LRRC28-210ENST00000558879 CCRL2O00421 344 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 SLC31A2O15432 143 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 CRTAPO75718 401 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-210ENST00000558879 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
LRRC28-210ENST00000558879 FUT3P21217 361 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 VHLP40337 213 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 HES1Q14469 280 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 SPHARQ15513 63 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 ACSM3Q53FZ2 586 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 C1orf100Q5SVJ3 147 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 TRAT1Q6PIZ9 186 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-210ENST00000558879 RTN4IP1Q8WWV3 396 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-210ENST00000558879 CST11Q9H112 138 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 RAB9BQ9NP90 201 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 TSSC4Q9Y5U2 329 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-210ENST00000558879 PEX16Q9Y5Y5 336 aa13.48□□□□□ -0.25
LRRC28-210ENST00000558879 A0A1W2PRX2 142 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 PDCD6O75340 191 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 IGHG2P01859 326 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 HBZP02008 142 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 UBBP0CG47 229 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 CD37P11049 281 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 RCC1P18754 421 aaPredicted RBP13.47□□□□□ -0.25
LRRC28-210ENST00000558879 REG1BP48304 166 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 ZNF554Q86TJ5 538 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 MRPL30Q8TCC3 161 aaKnown RBP13.47□□□□□ -0.25
LRRC28-210ENST00000558879 FAM46BQ96A09 425 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 TMED9Q9BVK6 235 aa13.47□□□□□ -0.25
LRRC28-210ENST00000558879 PTGES3LE9PB15 166 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 H0YHG0 523 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 SPINT2O43291 252 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 UCHL1P09936 223 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 VSIG8P0DPA2 414 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 MYF6P23409 242 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 IL3RAP26951 378 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 MED22Q15528 200 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 C9orf152Q5JTZ5 239 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 RBM48Q5RL73 367 aaKnown RBP13.46□□□□□ -0.25
LRRC28-210ENST00000558879 WFDC9Q8NEX5 89 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 OR1L1Q8NH94 360 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.25
LRRC28-210ENST00000558879 ANKRD60Q9BZ19 345 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 DUSP21Q9H596 190 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 SCN3BQ9NY72 215 aa13.46□□□□□ -0.25
LRRC28-210ENST00000558879 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 TCRBV4S1A1TA0A5B7 111 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 PSMB11A5LHX3 300 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 TXNL1O43396 289 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 MPIG6BO95866 241 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 PF4V1P10720 104 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 CHATP28329 748 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 CD1BP29016 333 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 ZNF134P52741 427 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 UNC119Q13432 240 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 MOB3BQ86TA1 216 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 TGIF2LXQ8IUE1 241 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 Q8N9W7 124 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 PHF21AQ96BD5 680 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 TM2D1Q9BX74 207 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 GNG12Q9UBI6 72 aa13.45□□□□□ -0.26
LRRC28-210ENST00000558879 UBE2QL1A1L167 161 aa13.44□□□□□ -0.26
LRRC28-210ENST00000558879 TMEM14DPA8MWL7 114 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms