RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 DRAM1Q8N682 238 aa12.35□□□□□ -0.43
CSHL1-208ENST00000558609 OR10X1Q8NGY0 326 aa12.35□□□□□ -0.43
CSHL1-208ENST00000558609 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
CSHL1-208ENST00000558609 TMED9Q9BVK6 235 aa12.35□□□□□ -0.43
CSHL1-208ENST00000558609 GFOD1Q9NXC2 390 aa12.35□□□□□ -0.43
CSHL1-208ENST00000558609 ETAA1Q9NY74 926 aa12.35□□□□□ -0.43
CSHL1-208ENST00000558609 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-208ENST00000558609 SC5DO75845 299 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 LPLP06858 475 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 SNRNP70P08621 437 aaKnown RBP12.34□□□□□ -0.43
CSHL1-208ENST00000558609 UBBP0CG47 229 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 CD37P11049 281 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 ZNF816Q0VGE8 651 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-208ENST00000558609 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-208ENST00000558609 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 LYG1Q8N1E2 194 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 OR5AU1Q8NGC0 362 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 OR56B4Q8NH76 319 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 ANKRD60Q9BZ19 345 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 CST11Q9H112 138 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 RAB9BQ9NP90 201 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 TRAPPC2LQ9UL33 140 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
CSHL1-208ENST00000558609 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 C12orf77C9JDV5 145 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
CSHL1-208ENST00000558609 SRMP19623 302 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 CD83Q01151 205 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 TPBGQ13641 420 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 C6orf183Q5T699 404 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 CENPVQ7Z7K6 275 aaPredicted RBP12.33□□□□□ -0.44
CSHL1-208ENST00000558609 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
CSHL1-208ENST00000558609 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 SH2D7A6NKC9 451 aaPredicted RBP12.32□□□□□ -0.44
CSHL1-208ENST00000558609 CCRL2O00421 344 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 HSD17B6O14756 317 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 SPINT2O43291 252 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 RGS10O43665 173 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 PDCD6O75340 191 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 UCHL1P09936 223 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 EBI3Q14213 229 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
CSHL1-208ENST00000558609 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
CSHL1-208ENST00000558609 OR4F17Q8NGA8 305 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 UFD1Q92890 307 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
CSHL1-208ENST00000558609 MBNL3Q9NUK0 354 aaKnown RBP12.32□□□□□ -0.44
CSHL1-208ENST00000558609 IGHV3-43A0A0B4J1X8 118 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 SLC22A1O15245 554 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 FGF16O43320 207 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 MPIG6BO95866 241 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 IGKV1D-33P01593 117 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 IGKV1-33P01594 117 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 HBZP02008 142 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 IGHV3-43DP0DP04 118 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 TMEM11P17152 192 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
CSHL1-208ENST00000558609 CRHBPP24387 322 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 HES1Q14469 280 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 LIPKQ5VXJ0 399 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 SLC25A48Q6ZT89 311 aaKnown RBP12.31□□□□□ -0.44
CSHL1-208ENST00000558609 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 ZNF554Q86TJ5 538 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 C1QL4Q86Z23 238 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 C5orf56Q8N8D9 126 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 ZNF439Q8NDP4 499 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 R3HDM4Q96D70 268 aa12.31□□□□□ -0.44
CSHL1-208ENST00000558609 IL3RAP26951 378 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 CHATP28329 748 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 ZNF134P52741 427 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 ZNF137PP52743 207 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
CSHL1-208ENST00000558609 HNF4GQ14541 408 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 TRAM1Q15629 374 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 TMEM91Q6ZNR0 172 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 PRSS48Q7RTY5 328 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 IZUMO1Q8IYV9 350 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
CSHL1-208ENST00000558609 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms