RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DIMT1Q9UNQ2 313 aaKnown RBP12.26□□□□□ -0.45
TPM1-211ENST00000558314 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 AP4M1O00189 453 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 SPINT2O43291 252 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 CRTAPO75718 401 aaPredicted RBP12.25□□□□□ -0.45
TPM1-211ENST00000558314 IGHG2P01859 326 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
TPM1-211ENST00000558314 MYCNOSP40205 109 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 VHLP40337 213 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 GPR12P47775 334 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 PAX5Q02548 391 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 CD69Q07108 199 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 GPR176Q14439 515 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 DEFB136Q30KP8 78 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 VAX1Q5SQQ9 334 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 RAB12Q6IQ22 244 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 UNQ9370/PRO34162Q6UXP9 181 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 ZNF497Q6ZNH5 498 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 RTN4IP1Q8WWV3 396 aaPredicted RBP12.25□□□□□ -0.45
TPM1-211ENST00000558314 IFT22Q9H7X7 185 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 ZFP57Q9NU63 452 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 PEX16Q9Y5Y5 336 aa12.25□□□□□ -0.45
TPM1-211ENST00000558314 TRBV5-5A0A0J9YX44 114 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 C12orf77C9JDV5 145 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 ORC5O43913 435 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 MOSP00540 346 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 IGFBP3P17936 291 aaPredicted RBP12.24□□□□□ -0.45
TPM1-211ENST00000558314 MYF6P23409 242 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 YIF1BQ5BJH7 314 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 CXorf66Q5JRM2 361 aaPredicted RBP12.24□□□□□ -0.45
TPM1-211ENST00000558314 TTC23Q5W5X9 447 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
TPM1-211ENST00000558314 TEX38Q6PEX7 206 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 Q8N9W7 124 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 SETD9Q8NE22 299 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 OR52M1Q8NGK5 317 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 TFAP2CQ92754 450 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 GGHQ92820 318 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 RDH12Q96NR8 316 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 MCRIP2Q9BUT9 160 aaKnown RBP12.24□□□□□ -0.45
TPM1-211ENST00000558314 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
TPM1-211ENST00000558314 HBZP02008 142 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 SLC2A2P11168 524 aaPredicted RBP12.23□□□□□ -0.45
TPM1-211ENST00000558314 ST3GAL4Q11206 333 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 GPR50Q13585 617 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 PNLIPRP3Q17RR3 467 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 NKAPLQ5M9Q1 402 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 C6orf183Q5T699 404 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 IZUMO1Q8IYV9 350 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 DHRSXQ8N5I4 330 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 FAM46BQ96A09 425 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 S1PR3Q99500 378 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 ABCG5Q9H222 651 aa12.23□□□□□ -0.45
TPM1-211ENST00000558314 LIN7CQ9NUP9 197 aaKnown RBP12.23□□□□□ -0.45
TPM1-211ENST00000558314 CCL24O00175 119 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 MYL12BO14950 172 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 RRP9O43818 475 aaKnown RBP12.22□□□□□ -0.45
TPM1-211ENST00000558314 MGMTP16455 207 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 RCC1P18754 421 aaPredicted RBP12.22□□□□□ -0.45
TPM1-211ENST00000558314 VDAC1P21796 283 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 CD1BP29016 333 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 CAPGP40121 348 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 ZNF134P52741 427 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 F2RL1P55085 397 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 RPS11P62280 158 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM1-211ENST00000558314 EBI3Q14213 229 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 CT45A1Q5HYN5 189 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 C5orf24Q7Z6I8 188 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 OR52L2PQ8NGH6 319 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 CT45A3Q8NHU0 189 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 PGLYRP3Q96LB9 341 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 HSPB9Q9BQS6 159 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 GON7Q9BXV9 100 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 DCLRE1BQ9H816 532 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
TPM1-211ENST00000558314 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 CELP19835 753 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 FSTP19883 344 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 SOX6P35712 828 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
TPM1-211ENST00000558314 TAS2R43P59537 309 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 ADARB1P78563 741 aaKnown RBP12.21□□□□□ -0.45
TPM1-211ENST00000558314 EGFEM1PQ0D2K5 195 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 GNMTQ14749 295 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 SLC25A48Q6ZT89 311 aaKnown RBP12.21□□□□□ -0.45
TPM1-211ENST00000558314 AHSA2Q719I0 299 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 Q8N6K4 173 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 TMEM104Q8NE00 496 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 BPIFB6Q8NFQ5 453 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 P2RX4Q99571 388 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
TPM1-211ENST00000558314 DNAH3Q8TD57 4116 aa12.21□□□□□ -0.46
TPM1-211ENST00000558314 EFCAB10A6NFE3 127 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms