RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 EFNB2P52799 333 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 TMEM33P57088 247 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 S100A10P60903 97 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 HLA-DRB3P79483 266 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 BAXQ07812 192 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 ZP4Q12836 540 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 RAB32Q13637 225 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 PMS2P11Q13670 270 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 GNMTQ14749 295 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 ZNF74Q16587 644 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 ZNF506Q5JVG8 444 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 ZNF429Q86V71 674 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 TUSC5Q8IXB3 177 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 C17orf78Q8N4C9 275 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 C1orf162Q8NEQ5 155 aaPredicted RBP6.9□□□□□ -1.3
RTF1-205ENST00000558298 SLC24A4Q8NFF2 622 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SEMA6DQ8NFY4 1073 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SLC26A10Q8NG04 563 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 FGGYQ96C11 551 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SLC25A44Q96H78 314 aaPredicted RBP6.9□□□□□ -1.3
RTF1-205ENST00000558298 Q96M85 177 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 NMNAT3Q96T66 252 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SPIN2AQ99865 258 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 SPIN2BQ9BPZ2 258 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 RBM24Q9BX46 236 aaKnown RBP6.9□□□□□ -1.3
RTF1-205ENST00000558298 LINC00470Q9BZP3 86 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 LYRM2Q9NU23 88 aaPredicted RBP6.9□□□□□ -1.3
RTF1-205ENST00000558298 OR14J1Q9UGF5 321 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 ALPK2Q86TB3 2170 aa6.9□□□□□ -1.3
RTF1-205ENST00000558298 PLCE1Q9P212 2302 aa6.9□□□□□ -1.31
RTF1-205ENST00000558298 SPG11Q96JI7 2443 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 LOC100509620A0A075B734 347 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 IFITM10A6NMD0 228 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 SERPINE3A8MV23 424 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 H0YIZ8 118 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 PHOX2AO14813 284 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 AGPAT2O15120 278 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 TRAF3IP2O43734 574 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 ARG1P05089 322 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 CTSDP07339 412 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 TMEM225BP0DP42 221 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 GZMBP10144 247 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR10J1P30954 320 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR3A1P47881 315 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 KRTAP10-9P60411 292 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 HIST1H3AP68431 136 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 FHL1Q13642 323 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 IAH1Q2TAA2 248 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 ALG10Q5BKT4 473 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 C1orf194Q5T5A4 169 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 FBXW9Q5XUX1 488 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 MEX3BQ6ZN04 569 aaKnown RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 H1FNTQ75WM6 255 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 LHFPL1Q86WI0 220 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 JAGN1Q8N5M9 183 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 SLC35G3Q8N808 338 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 LRTM2Q8N967 370 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 CNEP1R1Q8N9A8 125 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 ZIC4Q8N9L1 334 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR52N4Q8NGI2 321 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR51A2Q8NGJ7 313 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR5D14Q8NGL3 314 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OR1P1Q8NH06 330 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 ROBO4Q8WZ75 1007 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 CORO2AQ92828 525 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 APH1AQ96BI3 265 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 FBXO17Q96EF6 278 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OXGR1Q96P68 337 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 SYT3Q9BQG1 590 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 SCRT1Q9BWW7 348 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 OPN3Q9H1Y3 402 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
RTF1-205ENST00000558298 MMP24Q9Y5R2 645 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 PUS1Q9Y606 427 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTF1-205ENST00000558298 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
RTF1-205ENST00000558298 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 KIR2DL5BA0A0G2JN68 375 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 KIR2DL5BA0A0G2JPC4 375 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 DUXBA0A1W2PPF3 345 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 FAM171A2A8MVW0 826 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 C16orf97H3BN30 126 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 ST8SIA3O43173 380 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 RAMP1O60894 148 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OR6A2O95222 327 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 IGHMP01871 453 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 PMP2P02689 132 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 OPN1LWP04000 364 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 RD3LP0DJH9 198 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 KLK2P20151 261 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CRYGSP22914 178 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 DUSP1P28562 367 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 GRPRP30550 384 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 CD200P41217 278 aa6.88□□□□□ -1.31
RTF1-205ENST00000558298 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
RTF1-205ENST00000558298 EIF2B1Q14232 305 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms