RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 LIPGQ9Y5X9 500 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 LAMA1P25391 3075 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 A0A1B0GWJ7 208 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 TMEM30CPA0ZSE6 113 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 NXPH2O95156 264 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 GHRHP01286 108 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 IGKV3-15P01624 115 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 CEACAM1P13688 526 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 FOLR2P14207 255 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ZNF44P15621 663 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 RAB5BP61020 215 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 RPL23AP62750 156 aaKnown RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 EWSR1Q01844 656 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPG11-209ENST00000558253 IGFBP7Q16270 282 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ZNF718Q3SXZ3 478 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 RNF212Q495C1 297 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 MBNL2Q5VZF2 373 aaKnown RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 DHRS7BQ6IAN0 325 aaPredicted RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 SLC35E4Q6ICL7 350 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 IGFL3Q6UXB1 125 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 MEX3BQ6ZN04 569 aaKnown RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 Q6ZPA2 131 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ZNF818PQ6ZRF7 136 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 STX12Q86Y82 276 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 FAM90A1Q86YD7 464 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 FAM219AQ8IW50 185 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ZADH2Q8N4Q0 377 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 SCCPDHQ8NBX0 429 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 NAXEQ8NCW5 288 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 OR52M1Q8NGK5 317 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 OR11L1Q8NGX0 322 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 TRIB1Q96RU8 372 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ADAT1Q9BUB4 502 aaKnown RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 TLNRD1Q9H1K6 362 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 ASCL3Q9NQ33 180 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 TRAPPC2LQ9UL33 140 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 RNF150Q9ULK6 438 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 RCL1Q9Y2P8 373 aaKnown RBP7.06□□□□□ -1.28
SPG11-209ENST00000558253 MMP24Q9Y5R2 645 aa7.06□□□□□ -1.28
SPG11-209ENST00000558253 NCKAP5O14513 1909 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 DNAH14Q0VDD8 3507 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 IGKV1-6A0A0C4DH72 117 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 OOEPA6NGQ2 149 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 SLC33A1O00400 549 aaPredicted RBP7.05□□□□□ -1.28
SPG11-209ENST00000558253 HS3ST1O14792 307 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 OR2H2O95918 312 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 IGLV1-44P01699 117 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 HBE1P02100 147 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 OR8U8P0C7N1 319 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 SNCAP37840 140 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 RPL35P42766 123 aaKnown RBP7.05□□□□□ -1.28
SPG11-209ENST00000558253 LPAR6P43657 344 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 CAMLGP49069 296 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 CCL11P51671 97 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 ARHGDIBP52566 201 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 HERPUD1Q15011 391 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 PDCD1Q15116 288 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 C3AR1Q16581 482 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 HFEQ30201 348 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 ACSF3Q4G176 576 aaPredicted RBP7.05□□□□□ -1.28
SPG11-209ENST00000558253 MIDNQ504T8 468 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 AVPI1Q5T686 147 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 Q6ZRG5 221 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 BEND4Q6ZU67 534 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 FDCSPQ8NFU4 85 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 OR1J1Q8NGS3 322 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 SLC25A40Q8TBP6 338 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 RDH5Q92781 318 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 PARD6GQ9BYG4 376 aaPredicted RBP7.05□□□□□ -1.28
SPG11-209ENST00000558253 OR2J1Q9GZK6 312 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 RAB9BQ9NP90 201 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 CCL28Q9NRJ3 127 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 C19orf12Q9NSK7 152 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 ERRFI1Q9UJM3 462 aaPredicted RBP7.05□□□□□ -1.28
SPG11-209ENST00000558253 LAMP3Q9UQV4 416 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 WSB1Q9Y6I7 421 aa7.05□□□□□ -1.28
SPG11-209ENST00000558253 PRUNE2Q8WUY3 3088 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 IGKV1D-13A0A0B4J2D9 117 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 HSD17B6O14756 317 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 NKX2-8O15522 239 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 ADAM20O43506 726 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 IFNA5P01569 189 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 PRH1P02810 166 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 FABP1P07148 127 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 IGKV1-13P0DP09 117 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 GCH1P30793 250 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 CFHR2P36980 270 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
SPG11-209ENST00000558253 IDH3GP51553 393 aaPredicted RBP7.04□□□□□ -1.28
SPG11-209ENST00000558253 TLE4Q04727 773 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 PSG7Q13046 419 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 ZNF154Q13106 437 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 SMIM21Q3B7S5 101 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 SSX8Q7RTT4 187 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 DMRTC2Q8IXT2 367 aaPredicted RBP7.04□□□□□ -1.28
SPG11-209ENST00000558253 PUSL1Q8N0Z8 303 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms