RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HTD2P86397 168 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 RBMS2Q15434 407 aaKnown RBP13.93□□□□□ -0.18
SNX1-203ENST00000558040 Q5PR19 223 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 TMEM200BQ69YZ2 307 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 IDO2Q6ZQW0 420 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 TCF23Q7RTU1 214 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 CHPT1Q8WUD6 406 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
SNX1-203ENST00000558040 RPUSD1Q9UJJ7 312 aaKnown RBP13.93□□□□□ -0.18
SNX1-203ENST00000558040 TRBV6-7A0A0A0MS04 114 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 IGKV1-6A0A0C4DH72 117 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 MEX3AA1L020 520 aaKnown RBP13.92□□□□□ -0.18
SNX1-203ENST00000558040 A8MXK9 166 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
SNX1-203ENST00000558040 ZNF728P0DKX0 622 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 CGB3P0DN86 165 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 CGB7P0DN87 165 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 ECI1P42126 302 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 CCR6P51684 374 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 ZNF273Q14593 569 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 PLET1Q6UQ28 207 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 DUSP18Q8NEJ0 188 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 OR10A7Q8NGE5 316 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 GIMAP1Q8WWP7 306 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 SLC25A21Q9BQT8 299 aaPredicted RBP13.92□□□□□ -0.18
SNX1-203ENST00000558040 ZNF2Q9BSG1 426 aaPredicted RBP13.92□□□□□ -0.18
SNX1-203ENST00000558040 LINC00574Q9H8X3 128 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 ZNF69Q9UC07 566 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 DCHS2Q6V1P9 2916 aa13.92□□□□□ -0.18
SNX1-203ENST00000558040 GCN1Q92616 2671 aaKnown RBP13.91□□□□□ -0.18
SNX1-203ENST00000558040 PPIAL4CA0A0B4J2A2 164 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 IGHV4-61A0A0C4DH41 118 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 F2RL2O00254 374 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 FOXH1O75593 365 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 LIPFP07098 398 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 PPIAL4GP0DN37 164 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 USF1P22415 310 aaPredicted RBP13.91□□□□□ -0.18
SNX1-203ENST00000558040 FPR2P25090 351 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 FCGR2CP31995 323 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 HERV-K104P61576 105 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 OXA1LQ15070 435 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 TERB2Q8NHR7 220 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 RFESDQ8TAC1 157 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 UBALD1Q8TB05 177 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 DMRTB1Q96MA1 342 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 OCEL1Q9H607 264 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 OR2S2Q9NQN1 319 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 IDI2-AS1Q9NZ38 188 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 GNG12Q9UBI6 72 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
SNX1-203ENST00000558040 ARID1AO14497 2285 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 hCG_1809904A0A1W2PP81 198 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 A0A1W2PPE2 198 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 A0A1W2PR64 198 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 A0A1W2PRV1 198 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 FAM172BPA6NC97 362 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 KIAA1324LA8MWY0 1029 aaPredicted RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 ENSAO43768 121 aaKnown RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 RGS11O94810 467 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 NDUFB6O95139 128 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 TCRBP04435 133 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 NFYAP23511 347 aaPredicted RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 ZNF660Q6AZW8 331 aaPredicted RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 HEPN1Q6WQI6 88 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 C5orf24Q7Z6I8 188 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 LY6G5BQ8NDX9 201 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 SCGB3A2Q96PL1 93 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 OR1A1Q9P1Q5 309 aa13.9□□□□□ -0.18
SNX1-203ENST00000558040 FASNP49327 2511 aaKnown RBP13.9□□□□□ -0.18
SNX1-203ENST00000558040 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 C22orf46C9J442 243 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 PPYP01298 95 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 RBP4P02753 201 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 CCL3L1P16619 93 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 AADACP22760 399 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 CEACAM6P40199 344 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
SNX1-203ENST00000558040 LTC4SQ16873 150 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 CCBE1Q6UXH8 406 aaPredicted RBP13.89□□□□□ -0.19
SNX1-203ENST00000558040 OR52L2PQ8NGH6 319 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 MOB3AQ96BX8 217 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 RDH8Q9NYR8 311 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 SPG11Q96JI7 2443 aa13.89□□□□□ -0.19
SNX1-203ENST00000558040 PTPN13Q12923 2485 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 YPEL1O60688 119 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 TUSC2O75896 110 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 OMGP23515 440 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 DLX6P56179 175 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 LCN2P80188 198 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 PRAMEF5Q5TYX0 476 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms