RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF286AQ9HBT8 521 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 HBZP02008 142 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 CD3GP09693 182 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 CD34P28906 385 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 ARL6IP1Q15041 203 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 CDNFQ49AH0 187 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 UTF1Q5T230 341 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 ZNF880Q6PDB4 577 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 JMJD8Q96S16 334 aa20.77■□□□□ 0.91
SMAD6-202ENST00000557916 TRBV6-6A0A0A6YYG2 114 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 SERPINE3A8MV23 424 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 FBP1P09467 338 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 BAMBIQ13145 260 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 Q6ZPA2 131 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 MOB1BQ7L9L4 216 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 SAMD12Q8N8I0 201 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 OR52M1Q8NGK5 317 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 OR1L1Q8NH94 360 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 C17orf50Q8WW18 174 aa20.76■□□□□ 0.91
SMAD6-202ENST00000557916 F2RL2O00254 374 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 SDCBPO00560 298 aaPredicted RBP20.75■□□□□ 0.91
SMAD6-202ENST00000557916 TOR1AO14656 332 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 VENTXO95231 258 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 UBE2NLQ5JXB2 153 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 LHFPL4Q7Z7J7 247 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 ZNF596Q8TC21 504 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 ACOT12Q8WYK0 555 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 LEAP2Q969E1 77 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 ISOC1Q96CN7 298 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 AJUBAQ96IF1 538 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 ABCG5Q9H222 651 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 COMMD3Q9UBI1 195 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 TBL2Q9Y4P3 447 aaKnown RBP20.75■□□□□ 0.91
SMAD6-202ENST00000557916 CEPT1Q9Y6K0 416 aa20.75■□□□□ 0.91
SMAD6-202ENST00000557916 POM121CA8CG34 1229 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 IGHV3-7P01780 117 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 PRRX1P54821 245 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 ARFRP1Q13795 201 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 Q6YL49 198 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 C5orf24Q7Z6I8 188 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 OR9G1Q8NH87 305 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 ESM1Q9NQ30 184 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMAD6-202ENST00000557916 DIABLOQ9NR28 239 aa20.74■□□□□ 0.91
SMAD6-202ENST00000557916 A0A0A6YYH2 397 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 IGHV3-43A0A0B4J1X8 118 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 A6NJ64 397 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 IGHV3-43DP0DP04 118 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 ZNF182P17025 639 aaPredicted RBP20.73■□□□□ 0.91
SMAD6-202ENST00000557916 LOXL3P58215 753 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 SRSF2Q01130 221 aaKnown RBP20.73■□□□□ 0.91
SMAD6-202ENST00000557916 HMGN3Q15651 99 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 TMEM30BQ3MIR4 351 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 OR4P4Q8NGL7 312 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 AP3S1Q92572 193 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 S100A16Q96FQ6 103 aaKnown RBP20.73■□□□□ 0.91
SMAD6-202ENST00000557916 Q9N2K0 584 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 GFOD1Q9NXC2 390 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 MGAT4AQ9UM21 535 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 PSG11Q9UQ72 335 aa20.73■□□□□ 0.91
SMAD6-202ENST00000557916 TRAV18A0A075B6X5 111 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 H3BMQ9 156 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 IGLV1-47P01700 117 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 MELTFP08582 738 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 GSTP1P09211 210 aaKnown RBP20.72■□□□□ 0.91
SMAD6-202ENST00000557916 ZDHHC22Q8N966 263 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 BEND2Q8NDZ0 799 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 GALMQ96C23 342 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 ZNRD1Q9P1U0 126 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 GNG12Q9UBI6 72 aa20.72■□□□□ 0.91
SMAD6-202ENST00000557916 ELF5Q9UKW6 265 aaPredicted RBP20.72■□□□□ 0.91
SMAD6-202ENST00000557916 CCDC160A6NGH7 325 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 J3QR06 171 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 HOXA3O43365 443 aaPredicted RBP20.71■□□□□ 0.91
SMAD6-202ENST00000557916 HTR1DP28221 377 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 TALDO1P37837 337 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 GNG10P50151 68 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 ZNF260Q3ZCT1 412 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 LDLRAD2Q5SZI1 272 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 MINOS1Q5TGZ0 78 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 HACD4Q5VWC8 232 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 FAM53AQ6NSI3 398 aaPredicted RBP20.71■□□□□ 0.91
SMAD6-202ENST00000557916 LDLRAD3Q86YD5 345 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 MALSU1Q96EH3 234 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 OR2S2Q9NQN1 319 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 MINOS1-NBL1R4GNA1 71 aa20.71■□□□□ 0.91
SMAD6-202ENST00000557916 TMEM235A6NFC5 223 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 DNAJC9-AS1A6NH13 148 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 FCGR3AP08637 254 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 PAX6P26367 422 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 SOX6P35712 828 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 HLA-DRB5Q30154 266 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 MZT2AQ6P582 158 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 OR10V1Q8NGI7 309 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 DUX5Q96PT3 197 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 MEGF9Q9H1U4 602 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 HLA-DRB3P79483 266 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 HTD2P86397 168 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 SLC9A3R2Q15599 337 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 SSX2Q16385 188 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms