RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FAM231DQ6ZW35 169 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ZCCHC24Q8N2G6 241 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 STX19Q8N4C7 294 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 UBL4BQ8N7F7 174 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 C15orf56Q8N910 161 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 GATD1Q8NB37 220 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR11H1Q8NG94 326 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR6N1Q8NGY5 312 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR11H2Q8NH07 326 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 DCAKDQ8WVC6 231 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ASB17Q8WXJ9 295 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ASB13Q8WXK3 278 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 EXOSC8Q96B26 276 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 C12orf43Q96C57 262 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CPNE2Q96FN4 548 aaPredicted RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF799Q96GE5 643 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR10C1Q96KK4 312 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR4K3Q96R72 315 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CMSS1Q9BQ75 279 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 SFXN3Q9BWM7 321 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF717Q9BY31 904 aaPredicted RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 MS4A6AQ9H2W1 248 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 IFI27L2Q9H2X8 130 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR52D1Q9H346 318 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TXNIPQ9H3M7 391 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 RPP21Q9H633 154 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 C11orf49Q9H6J7 331 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 NMNAT1Q9HAN9 279 aaPredicted RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 PDFQ9HBH1 243 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF331Q9NQX6 463 aaPredicted RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ARMC1Q9NVT9 282 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 RPS6KB2Q9UBS0 482 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 PRO0628Q9UI54 55 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 RWDD2AQ9UIY3 292 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TP53TG3Q9ULZ0 132 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 C14orf166Q9Y224 244 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR51B4Q9Y5P0 310 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CCDC171Q6TFL3 1326 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ARHGEF10O15013 1369 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ZNFX1Q9P2E3 1918 aaKnown RBP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 GOLGA3Q08378 1498 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SYCP2Q9BX26 1530 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 IGKV6D-21A0A0A0MT36 114 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 TGIF2-C20orf24A0A0A6YYL0 155 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 IGHV1OR15-9A0A0B4J2B8 117 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 A0A0G2JMP0 313 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 A0A0U1RQV1 116 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 A0A1W2PP18 115 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PPP5D1E7EU14 171 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 TCAPO15273 167 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ARPC5O15511 151 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 CHP2O43745 196 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 FOXH1O75593 365 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 DHRS3O75911 302 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 S1PR2O95136 353 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 IFNA1P01562 189 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 APOC1P02654 83 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF823P16415 610 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ATF1P18846 271 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ELK4P28324 431 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 S100GP29377 79 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 TAF6P49848 677 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ESRRGP62508 458 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 FMODQ06828 376 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PMVKQ15126 192 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 MPPED2Q15777 294 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 C4orf26Q17RF5 130 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 LRRC26Q2I0M4 334 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 LRRC75BQ2VPJ9 315 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ACSBG2Q5FVE4 666 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SMARCD3Q6STE5 483 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 CLEC19AQ6UXS0 136 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 Q6ZSR6 202 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 GALNT10Q86SR1 603 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 MDP1Q86V88 176 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 COMMD7Q86VX2 200 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 C11orf53Q8IXP5 236 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 RNF175Q8N4F7 328 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF561Q8N587 486 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 DRAM1Q8N682 238 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF433Q8N7K0 673 aaPredicted RBP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR2Z1Q8NG97 314 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR4M2Q8NGB6 313 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR4C13Q8NGP0 309 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR10K1Q8NGX5 313 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR5W2Q8NH69 310 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 Q8WTZ3 238 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 TNFAIP8L1Q8WVP5 186 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PDXPQ96GD0 296 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SMARCD1Q96GM5 515 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PGLYRP3Q96LB9 341 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 METTL26Q96S19 204 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PITX2Q99697 317 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SIGMAR1Q99720 223 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 KIFC1Q9BW19 673 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 GGTLC1Q9BX51 225 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 FGF23Q9GZV9 251 aaPredicted RBP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ALX4Q9H161 411 aaPredicted RBP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR51I1Q9H343 314 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms