RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZNF2Q9BSG1 426 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-229ENST00000557348 ARV1Q9H2C2 271 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 ELOA3CA0A087WX78 387 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-229ENST00000557348 CXorf65A6NEN9 183 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 LILRA1O75019 489 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 NAPSAO96009 420 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 GLRXP35754 106 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 SELENOVP59797 346 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 ERVS71-1P61550 626 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 ERVK11-1P61568 191 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 ZNF154Q13106 437 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 TMEM268Q5VZI3 342 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 SLC22A25Q6T423 547 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 POC1AQ8NBT0 407 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 RNASE11Q8TAA1 199 aaKnown RBP10.74□□□□□ -0.69
SHMT2-229ENST00000557348 HDHD3Q9BSH5 251 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-229ENST00000557348 HRH4Q9H3N8 390 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 C5orf66Q9H5L9 145 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 RTTNQ86VV8 2226 aa10.74□□□□□ -0.69
SHMT2-229ENST00000557348 A0A087WWC5 75 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 PIGBOS1A0A0B4J2F0 54 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 EEF1E1-BLOC1S5C9J1V9 151 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SDCBPO00560 298 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SH2D1BO14796 132 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 DEGS1O15121 323 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 MED6O75586 246 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 NXPH2O95156 264 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 DIRAS3O95661 229 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 S100A2P29034 98 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 MPV17P39210 176 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 PPT1P50897 306 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 AKR1C2P52895 323 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 HERV-K104P61576 105 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 AKR1C1Q04828 323 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ATXN7L3Q14CW9 347 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-229ENST00000557348 BEX5Q5H9J7 111 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SGPP2Q8IWX5 399 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 FAM185AQ8N0U4 392 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 MAFIPQ8WZ33 124 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SNRNP40Q96DI7 357 aaKnown RBP10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SYT3Q9BQG1 590 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 Q9N2K0 584 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 C7orf77A4D0Y5 90 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 BTBD17A6NE02 478 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 M0R1B8 84 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SIGLEC5O15389 551 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 TK1P04183 234 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 OR8U8P0C7N1 319 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ZNF728P0DKX0 622 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 BMP5P22003 454 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 NFYBP25208 207 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ZNF83P51522 516 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 KLRB1Q12918 225 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ZNF146Q15072 292 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ZFP82Q8N141 532 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 RPRMLQ8N4K4 120 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 SUMF2Q8NBJ7 301 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
SHMT2-229ENST00000557348 VKORC1Q9BQB6 163 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 RTBDNQ9BSG5 229 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-229ENST00000557348 FN3KRPQ9HA64 309 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 RAXQ9Y2V3 346 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 FAM96BQ9Y3D0 163 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 ATP23Q9Y6H3 246 aa10.73□□□□□ -0.69
SHMT2-229ENST00000557348 BORCS7-ASMTA0A0B4J1R7 106 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 A0A0G2JNJ9 132 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 C1QTNF9BB2RNN3 333 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 SEC14L6B5MCN3 397 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 TRDCB7Z8K6 153 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 C16orf97H3BN30 126 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 CCSO14618 274 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 PPIHO43447 177 aaKnown RBP10.72□□□□□ -0.69
SHMT2-229ENST00000557348 CLN5O75503 358 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 TSPAN15O95858 294 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 C1QTNF9P0C862 333 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 SFTPCP11686 197 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 SNCAP37840 140 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 RBMXP38159 391 aaKnown RBP10.72□□□□□ -0.69
SHMT2-229ENST00000557348 CD200P41217 278 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 KLF3P57682 345 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-229ENST00000557348 SRSF3P84103 164 aaKnown RBP10.72□□□□□ -0.69
SHMT2-229ENST00000557348 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-229ENST00000557348 ABCA11PQ4W5N1 156 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 TMEM108Q6UXF1 575 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 KCTD9Q7L273 389 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 GGACTQ9BVM4 153 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 HES4Q9HCC6 221 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 NGBQ9NPG2 151 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 SIRT7Q9NRC8 400 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms