RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 RPSAP08865 295 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 IGHV3-43DP0DP04 118 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 IGFBP3P17936 291 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 F2RL1P55085 397 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 RPS11P62280 158 aaKnown RBP eCLIP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 MRPL28Q13084 256 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 KIAA0141Q14154 515 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 PNLIPRP3Q17RR3 467 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 OR2G6Q5TZ20 316 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 C5orf24Q7Z6I8 188 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 GAPTQ8N292 157 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 FAM71E2Q8N5Q1 922 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 ZNF485Q8NCK3 441 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 OR13C5Q8NGS8 318 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 GPR148Q8TDV2 347 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 CCDC107Q8WV48 283 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 ARL11Q969Q4 196 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 TMEM106AQ96A25 262 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 MRPL48Q96GC5 212 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 GPER1Q99527 375 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 MCRIP2Q9BUT9 160 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 FAM192AQ9GZU8 254 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 LIN7CQ9NUP9 197 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 FAM118AQ9NWS6 357 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 ING4Q9UNL4 249 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 ORC6Q9Y5N6 252 aa8.73□□□□□ -1.01
HNRNPC-231ENST00000557336 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 TRAV8-7A0A075B6U6 113 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 LOC100130705A0A1B0GUX0 176 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 TMEM30CPA0ZSE6 113 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 NCBP2LA6PVI3 153 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 C12orf77C9JDV5 145 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 AP4M1O00189 453 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 OGG1O15527 345 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 ORC5O43913 435 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 CIB2O75838 187 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 CD1BP29016 333 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 ZNF93P35789 620 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 CDX1P47902 265 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 ZNF137PP52743 207 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 SLC35B1P78383 322 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 DGCR2P98153 550 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 FHL3Q13643 280 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 KIR2DS1Q14954 304 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 DDI2Q5TDH0 399 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 RPL22L1Q6P5R6 122 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 LYPD6Q86Y78 171 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 FOXRED2Q8IWF2 684 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 OR2T10Q8NGZ9 312 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 S1PR3Q99500 378 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 METTL9Q9H1A3 318 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 RCC2Q9P258 522 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 CLEC2DQ9UHP7 191 aa8.72□□□□□ -1.01
HNRNPC-231ENST00000557336 TRBV5-5A0A0J9YX44 114 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 SDCBPO00560 298 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 MAGEB3O15480 346 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 MPZL2O60487 215 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 GPX5O75715 221 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 IGHG4P01861 327 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 SERPINA2P20848 420 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 PSMB8P28062 276 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 FOXE3Q13461 319 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 GPR50Q13585 617 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 MPV17LQ2QL34 196 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 CCDC58Q4VC31 144 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 DMKNQ6E0U4 476 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 ZFP1Q6P2D0 407 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 OR1L1Q8NH94 360 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 MYOZ3Q8TDC0 251 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 DPF1Q92782 380 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 CPNE2Q96FN4 548 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 RITA1Q96K30 269 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 Q96MT0 163 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 PRR25Q96S07 402 aa8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 RPL36Q9Y3U8 105 aaKnown RBP8.71□□□□□ -1.02
HNRNPC-231ENST00000557336 CSMD3Q7Z407 3707 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 MOSP00540 346 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 IGF1P05019 195 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 ELANEP08246 267 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 RCC1P18754 421 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 PPIFP30405 207 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 BDKRB2P30411 391 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 ADARB1P78563 741 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 SLC22A6Q4U2R8 563 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 SIGIRRQ6IA17 410 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 LINC00596Q86U02 117 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 GHSRQ92847 366 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 SMIM19Q96E16 107 aa8.7□□□□□ -1.02
HNRNPC-231ENST00000557336 PGLYRP3Q96LB9 341 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms