RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DYNLRB2Q8TF09 96 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF727A8MUV8 499 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 CHEK1O14757 476 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 IGF2P01344 180 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 SLC25A5P05141 298 aaKnown RBP14.94□□□□□ -0.02
PTPN21-208ENST00000556564 PHYHD1Q5SRE7 291 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 CA11O75493 328 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 FCGR3AP08637 254 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 CNN1P51911 297 aaKnown RBP14.93□□□□□ -0.02
PTPN21-208ENST00000556564 IL13RA2Q14627 380 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 CLEC18BQ6UXF7 455 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 OR5B3Q8NH48 314 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 MT-ND4LP03901 98 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 MPV17P39210 176 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 BVESQ8NE79 360 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 TMEM208Q9BTX3 173 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 FRMPD3Q5JV73 1810 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 COX5BP10606 129 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 CLDN18P56856 261 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 IGSF11Q5DX21 431 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 C10orf128Q5T292 105 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 LEAP2Q969E1 77 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 PATZ1Q9HBE1 687 aaKnown RBP14.93□□□□□ -0.02
PTPN21-208ENST00000556564 UMAD1C9J7I0 102 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 KRBOX1C9JBD0 128 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 GAPDHP04406 335 aaKnown RBP14.93□□□□□ -0.02
PTPN21-208ENST00000556564 FAM106CPP0CH98 169 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 ROM1Q03395 351 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 PLAC9Q5JTB6 97 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 LIAT1Q6ZQX7 453 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 WFDC3Q8IUB2 231 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 V9GYS6 101 aa14.93□□□□□ -0.02
PTPN21-208ENST00000556564 MED19A0JLT2 244 aaPredicted RBP14.92□□□□□ -0.02
PTPN21-208ENST00000556564 BAGE3Q86Y29 109 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 BAGE2Q86Y30 109 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 PGLYRP3Q96LB9 341 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 PARD6AQ9NPB6 346 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 KLK2P20151 261 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 S100A4P26447 101 aaKnown RBP14.92□□□□□ -0.02
PTPN21-208ENST00000556564 RPL35P42766 123 aaKnown RBP14.92□□□□□ -0.02
PTPN21-208ENST00000556564 GSTZ1O43708 216 aaPredicted RBP14.92□□□□□ -0.02
PTPN21-208ENST00000556564 PLXNA3P51805 1871 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 CTDSPLO15194 276 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 VDAC1P21796 283 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 MIXL1Q9H2W2 232 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 OR51B2Q9Y5P1 312 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 XKRY2A2RUG3 117 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 NEURL1O76050 574 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 SLC2A9Q9NRM0 540 aa14.92□□□□□ -0.02
PTPN21-208ENST00000556564 DYNLT3P51808 116 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 GCSAMQ8N6F7 178 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 CELA3BP08861 270 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 LCN2P80188 198 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF90Q03938 601 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 TMEM41BQ5BJD5 291 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 LILRB4Q8NHJ6 448 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 COL25A1Q9BXS0 654 aaPredicted RBP14.91□□□□□ -0.02
PTPN21-208ENST00000556564 PRNDQ9UKY0 176 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 IGKV1D-43A0A0B4J1Z2 117 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 CDKN1AP38936 164 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 DTD1Q8TEA8 209 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 SNRNP40Q96DI7 357 aaKnown RBP14.91□□□□□ -0.02
PTPN21-208ENST00000556564 P2RX4Q99571 388 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 GP6Q9HCN6 339 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 IDI2-AS1Q9NZ38 188 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 SCTP09683 121 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 NQO2P16083 231 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 DHRS9Q9BPW9 319 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 G6PC2Q9NQR9 355 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 NDUFA2O43678 99 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 PLSCR3Q9NRY6 295 aa14.91□□□□□ -0.02
PTPN21-208ENST00000556564 ASB13Q8WXK3 278 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 ISG15P05161 165 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 SMIM17P0DL12 118 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 FSTP19883 344 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 CD200P41217 278 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 FAM219AQ8IW50 185 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 OR2C3Q8N628 320 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 OR1L1Q8NH94 360 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 RNASE6Q93091 150 aaKnown RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 METTL1Q9UBP6 276 aaKnown RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 PCDHGA9Q9Y5G4 932 aaKnown RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF705GA8MUZ8 300 aaPredicted RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 J3KRW8 73 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 CD37P11049 281 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 DCAF12L2Q5VW00 463 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 OR1L4Q8NGR5 311 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 NTNG2Q96CW9 530 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 SMIM7Q9BQ49 75 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 RP1L1Q8IWN7 2480 aaPredicted RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 MOGAT2Q3SYC2 334 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF629Q9UEG4 869 aaPredicted RBP14.9□□□□□ -0.02
PTPN21-208ENST00000556564 V9GYH0 126 aa14.9□□□□□ -0.02
PTPN21-208ENST00000556564 CHST1O43916 411 aa14.89□□□□□ -0.03
PTPN21-208ENST00000556564 HOGA1Q86XE5 327 aa14.89□□□□□ -0.03
PTPN21-208ENST00000556564 ZNF561Q8N587 486 aa14.89□□□□□ -0.03
PTPN21-208ENST00000556564 MRPS18CQ9Y3D5 142 aaKnown RBP14.89□□□□□ -0.03
PTPN21-208ENST00000556564 IGHV2OR16-5A0A0B4J2B6 119 aa14.89□□□□□ -0.03
PTPN21-208ENST00000556564 GNLYP22749 145 aa14.89□□□□□ -0.03
PTPN21-208ENST00000556564 DUSP18Q8NEJ0 188 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms