RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 UTF1Q5T230 341 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 MEDAGQ5VYS4 303 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 OR8H3Q8N146 312 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 SYS1Q8N2H4 156 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 COMMD1Q8N668 190 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 ACBD7Q8N6N7 88 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 C5orf56Q8N8D9 126 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 PXT1Q8NFP0 134 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 OR10A7Q8NGE5 316 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 OR51D1Q8NGF3 324 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 OR10AC1Q8NH08 325 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 P2RX4Q99571 388 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 ZCCHC4Q9H5U6 513 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 ZMAT5Q9UDW3 170 aaKnown RBP7.87□□□□□ -1.15
SCFD1-220ENST00000556486 LINC00527Q9UJ94 153 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 EXOGQ9Y2C4 368 aaKnown RBP7.87□□□□□ -1.15
SCFD1-220ENST00000556486 MYRFQ9Y2G1 1151 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 FAM172BPA6NC97 362 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 F5H697 171 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 DEGS1O15121 323 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 IGHG2P01859 326 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 ALPLP05186 524 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 HTR1AP08908 422 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OCM2P0CE71 109 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OCMP0CE72 109 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 CALCBP10092 127 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OR3A4PP47883 348 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 RAB7AP51149 207 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 SNU13P55769 128 aaKnown RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 FAM3BP58499 235 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 TIRAPP58753 221 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 MRPL28Q13084 256 aaKnown RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 MADCAM1Q13477 382 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 ALKBH1Q13686 389 aaKnown RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 EBI3Q14213 229 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 IL13RA2Q14627 380 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 DEFB136Q30KP8 78 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OR2W3Q7Z3T1 314 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 AMIGO2Q86SJ2 522 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 SBSPONQ8IVN8 264 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 SERPINA12Q8IW75 414 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OR5D18Q8NGL1 313 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OR13C3Q8NGS6 347 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 OR13C9Q8NGT0 318 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 HAVCR2Q8TDQ0 301 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 TOMM40LQ969M1 308 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 RFT1Q96AA3 541 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 RPEQ96AT9 228 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 NOL4LQ96MY1 436 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 SPACA5Q96QH8 159 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 MYCBPQ99417 103 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 PPIL3Q9H2H8 161 aaKnown RBP7.86□□□□□ -1.15
SCFD1-220ENST00000556486 RIBC2Q9H4K1 309 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 CALYQ9NYX4 217 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 STEAP1Q9UHE8 339 aa7.86□□□□□ -1.15
SCFD1-220ENST00000556486 TRAV24A0A0B4J272 114 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 DAPL1A0PJW8 107 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 TMEM212A6NML5 194 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 SNTNA6NMZ2 147 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 SULT1B1O43704 296 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 ZFPL1O95159 310 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 C21orf33P30042 268 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-220ENST00000556486 MYCNOSP40205 109 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 RASSF2P50749 326 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 NHLH2Q02577 135 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 ATXN7L3Q14CW9 347 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-220ENST00000556486 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 RSBN1Q5VWQ0 802 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-220ENST00000556486 ASCL4Q6XD76 172 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 DRAM1Q8N682 238 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 C8orf31Q8N9H6 132 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 OR5D14Q8NGL3 314 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 OR13A1Q8NGR1 328 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 OR56B4Q8NH76 319 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 CNIH3Q8TBE1 160 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 RNFT2Q96EX2 444 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 CPNE2Q96FN4 548 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-220ENST00000556486 MRPL48Q96GC5 212 aaKnown RBP7.85□□□□□ -1.15
SCFD1-220ENST00000556486 C4orf36Q96KX1 117 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 IMPAD1Q9NX62 359 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 PSG11Q9UQ72 335 aa7.85□□□□□ -1.15
SCFD1-220ENST00000556486 MEIKINA0A087WXM9 373 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 H0YJX3 145 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 TRIAP1O43715 76 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 TMEM225BP0DP42 221 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 GABRB1P18505 474 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 NFYBP25208 207 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 RPS19P39019 145 aaKnown RBP7.84□□□□□ -1.15
SCFD1-220ENST00000556486 SCN1BQ07699 218 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 ZNF816Q0VGE8 651 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-220ENST00000556486 RBM39Q14498 530 aaKnown RBP7.84□□□□□ -1.15
SCFD1-220ENST00000556486 PAN3Q58A45 887 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms