RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 RAB9BQ9NP90 201 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 A3GALT2U3KPV4 340 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 ABCA2Q9BZC7 2435 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 ACANP16112 2415 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 TRBV6-6A0A0A6YYG2 114 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 RNASEK-C17orf49H0YIS7 233 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 FPR2P25090 351 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 BRD3OSQ6XYD6 125 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 TMEM133Q9H2Q1 129 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 IFT46Q9NQC8 304 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 GNG12Q9UBI6 72 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 MGAT4AQ9UM21 535 aa11.49□□□□□ -0.57
VIPAS39-208ENST00000556412 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 MEIOCA2RUB1 952 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 TRDCB7Z8K6 153 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 MELTFP08582 738 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 SCTP09683 121 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 DTYMKP23919 212 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 GNG10P50151 68 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 HMGN3Q15651 99 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 FAM131AQ6UXB0 335 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 GVQW1Q8N7I0 195 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 OR13D1Q8NGV5 346 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 C22orf15Q8WYQ4 148 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 GALMQ96C23 342 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 OR2S2Q9NQN1 319 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 TMEM160Q9NX00 188 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
VIPAS39-208ENST00000556412 FABP12A6NFH5 140 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 KIR2DS4P43632 304 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 UTF1Q5T230 341 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 OR52L2PQ8NGH6 319 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 ABHD1Q96SE0 405 aa11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-208ENST00000556412 IGKV1D-8A0A087WSZ0 117 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 VGLL3A8MV65 326 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 FABP7O15540 132 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 HSPA12AO43301 675 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 GSTT2BP0CG30 244 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 GNMTQ14749 295 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 CHRFAM7AQ494W8 412 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 ZNF554Q86TJ5 538 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 OR6Q1Q8NGQ2 317 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 CLEC7AQ9BXN2 247 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 MS4A7Q9GZW8 240 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 LINC00574Q9H8X3 128 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 SLC23A1Q9UHI7 598 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
VIPAS39-208ENST00000556412 POM121CA8CG34 1229 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 F2RL2O00254 374 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 TOR1AO14656 332 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 BET1O15155 118 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 ARG1P05089 322 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 LPLP06858 475 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 SRD5A1P18405 259 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 CBX5P45973 191 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 PYHIN1Q6K0P9 492 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 HCP5Q6MZN7 132 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 BEST4Q8NFU0 473 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 OR10A7Q8NGE5 316 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 C15orf40Q8WUR7 153 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 CSPG4Q6UVK1 2322 aa11.46□□□□□ -0.58
VIPAS39-208ENST00000556412 A0A1W2PPE3 182 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 NPFFO15130 113 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 UBE2E1P51965 193 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 LGALS4P56470 323 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 ARPC4P59998 168 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 IGSF11Q5DX21 431 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 HOGA1Q86XE5 327 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 OR4A4PQ8NGN8 299 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 OCSTAMPQ9BR26 566 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 GFOD1Q9NXC2 390 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 PTTG2Q9NZH5 202 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 OR1A1Q9P1Q5 309 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNRD1Q9P1U0 126 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 SOX21Q9Y651 276 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-208ENST00000556412 F8P00451 2351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms