RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TCN2P20062 427 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 GLRA1P23415 457 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 EPHA8P29322 1005 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 KCNJ3P48549 501 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MEOX2P50222 304 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 DUSP3P51452 185 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 FUT6P51993 359 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 EFNA3P52797 238 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SUCLG1P53597 346 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SUPT4H1P63272 117 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MRPS34P82930 218 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 BAXQ07812 192 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ENDOGQ14249 297 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CLINT1Q14677 625 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 HIST3H3Q16695 136 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 GUK1Q16774 197 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 PHLDA2Q53GA4 152 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AWAT1Q58HT5 328 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 KRBOX4Q5JUW0 171 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SPIN3Q5JUX0 258 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AKR1C8PQ5T2L2 129 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AADACL3Q5VUY0 350 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM268Q5VZI3 342 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 RPUSD3Q6P087 351 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 BTNL8Q6UX41 500 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MEX3BQ6ZN04 569 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AAED1Q7RTV5 226 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MRPL21Q7Z2W9 205 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 C6orf201Q7Z4U5 140 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 DPPA2Q7Z7J5 298 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF695Q8IW36 515 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZFP82Q8N141 532 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF561Q8N587 486 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR8G5Q8NG78 346 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR4A4PQ8NGN8 299 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR1J1Q8NGS3 322 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR1F12Q8NHA8 337 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 M1APQ8TC57 530 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 NEK7Q8TDX7 302 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SFT2D1Q8WV19 159 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 TCTEX1D2Q8WW35 142 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 RTN4IP1Q8WWV3 396 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MR1Q95460 341 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MRPL24Q96A35 216 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 GNPNAT1Q96EK6 184 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 DAZAP1Q96EP5 407 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 RRNAD1Q96FB5 475 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AKR1E2Q96JD6 320 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR10C1Q96KK4 312 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 C1orf147Q96MC9 270 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 GINS3Q9BRX5 216 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ADAT1Q9BUB4 502 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF700Q9H0M5 742 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 TLNRD1Q9H1K6 362 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SMDT1Q9H4I9 107 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 RNF122Q9H9V4 155 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SLC2A9Q9NRM0 540 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 IL36GQ9NZH8 169 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 AK3Q9UIJ7 227 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 STARD10Q9Y365 291 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 UBE2J1Q9Y385 318 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 TMED3Q9Y3Q3 217 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CSMD1Q96PZ7 3565 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MED13Q9UHV7 2174 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 NAV3Q8IVL0 2385 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 KNL1Q8NG31 2342 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 HEATR5AQ86XA9 2040 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MED13LQ71F56 2210 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ABCA2Q9BZC7 2435 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 IGHV3-15A0A0B4J1V0 119 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 KIR2DS1A0A191URI9 304 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A10PA6NDY2 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A18PA6NE21 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A16PA6NEW6 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A20PA6NIJ5 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A8PA6NJQ4 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A7PA6NKC0 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FOXI3A8MTJ6 420 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A22PA8MWA6 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A12PA8MX19 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A5PA8MXJ8 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A23PA8MXZ1 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ADAM10O14672 748 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TNFSF11O14788 317 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ANGPTL7O43827 346 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CBR3O75828 277 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 DFFBO76075 338 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 OR7C1O76099 320 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 IFNA5P01569 189 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TK1P04183 234 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CRYBA1P05813 215 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 GLAP06280 429 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CTXN2P0C2S0 81 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A15PP0C7V4 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A13PP0C7W8 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A14PP0C7W9 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAM90A24PP0C7X0 464 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 MMP9P14780 707 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 RPS2P15880 293 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms