RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 IDI2-AS1Q9NZ38 188 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF107Q9UII5 783 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-221ENST00000555773 RBMX2Q9Y388 322 aaKnown RBP10.24□□□□□ -0.77
SHMT2-221ENST00000555773 AUP1Q9Y679 476 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 ABCA1O95477 2261 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 ACANP16112 2415 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 DOCK11Q5JSL3 2073 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 MEX3AA1L020 520 aaKnown RBP10.23□□□□□ -0.77
SHMT2-221ENST00000555773 FABP7O15540 132 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 TOX4O94842 621 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 HBZP02008 142 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 SCTP09683 121 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 IGHV1-8P0DP01 117 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 MMP9P14780 707 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 CD40LGP29965 261 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 SSTR5P35346 364 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 PPP5CP53041 499 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 ERVFRD-1P60508 538 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 DGCR2P98153 550 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF846Q147U1 533 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF79Q15937 498 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 STEAP3Q658P3 488 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 GVQW1Q8N7I0 195 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 Q8N7P7 452 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 GCDHQ92947 438 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-221ENST00000555773 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
SHMT2-221ENST00000555773 SRRQ9GZT4 340 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 KLK11Q9UBX7 282 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 ANXA10Q9UJ72 324 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 SESN1Q9Y6P5 492 aa10.23□□□□□ -0.77
SHMT2-221ENST00000555773 FLNAP21333 2647 aaKnown RBP10.23□□□□□ -0.77
SHMT2-221ENST00000555773 A0A087X0M5 115 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 A0A1B0GX30 115 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 MEIS3P1A6NDR6 274 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 GSTT2P0CG29 244 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 GSTT2BP0CG30 244 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 Q3ZCU0 254 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 CHRFAM7AQ494W8 412 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 LY6G6FQ5SQ64 297 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 NCR3LG1Q68D85 454 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 LYSMD2Q8IV50 215 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 PRR18Q8N4B5 295 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 OR5AP2Q8NGF4 316 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 OR1L1Q8NH94 360 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 KIRREL1Q96J84 757 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 OR2S2Q9NQN1 319 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 JPT1Q9UK76 154 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 KCNS2Q9ULS6 477 aa10.22□□□□□ -0.77
SHMT2-221ENST00000555773 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■■■■■ 53.9
SHMT2-221ENST00000555773 IGKV1D-8A0A087WSZ0 117 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TRBV6-7A0A0A0MS04 114 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-221ENST00000555773 YPEL1O60688 119 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 MMP23AO75900 390 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 RGS11O94810 467 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 CSF1P09603 554 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF16P17020 682 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TBPP20226 339 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 OMGP23515 440 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 ZBTB25P24278 435 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 OR3A3P47888 321 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 LOXL3P58215 753 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TAS2R46P59540 309 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 ARPC4P59998 168 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 ACTBL2Q562R1 376 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 PRAMEF5Q5TYX0 476 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TMEM229BQ8NBD8 167 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 OR10J5Q8NHC4 309 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 IL1F10Q8WWZ1 152 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 DEDD2Q8WXF8 326 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 SNAPC3Q92966 411 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 UPRTQ96BW1 309 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 YPEL2Q96QA6 119 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 PCGF1Q9BSM1 259 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 CABLES2Q9BTV7 478 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 CCDC32Q9BV29 185 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TMPRSS13Q9BYE2 586 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TOLLIPQ9H0E2 274 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 TMEM133Q9H2Q1 129 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 GFOD1Q9NXC2 390 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 GNG12Q9UBI6 72 aa10.21□□□□□ -0.77
SHMT2-221ENST00000555773 WNK2Q9Y3S1 2297 aa10.21□□□□□ -0.78
SHMT2-221ENST00000555773 IGKV1-6A0A0C4DH72 117 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 ZNF736B4DX44 427 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-221ENST00000555773 HSPA12AO43301 675 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 NFYBP25208 207 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 CD34P28906 385 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 GDNFP39905 211 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 CEACAM6P40199 344 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 TAS2R19P59542 299 aa10.2□□□□□ -0.78
SHMT2-221ENST00000555773 AP3S2P59780 193 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms