RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
TUBB3-209ENST00000555609 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
TUBB3-209ENST00000555609 NCKAP5O14513 1909 aa13.79□□□□□ -0.2
TUBB3-209ENST00000555609 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
TUBB3-209ENST00000555609 KIAA1324LA8MWY0 1029 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-209ENST00000555609 CDRT15L2A8MXV6 281 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 PRR33A8MZF0 331 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-209ENST00000555609 SYNGR1O43759 233 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 UBE2KP61086 200 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 NANOS1Q8WY41 292 aaKnown RBP13.78□□□□□ -0.2
TUBB3-209ENST00000555609 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 NIPSNAP3BQ9BS92 247 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 ABHD14AQ9BUJ0 271 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 TRAV24A0A0B4J272 114 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 J3QT63 122 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 TGOLN2O43493 480 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
TUBB3-209ENST00000555609 ZNF154Q13106 437 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 SCGB1C1Q8TD33 95 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 RAB39BQ96DA2 213 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-209ENST00000555609 DLL3Q9NYJ7 618 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
TUBB3-209ENST00000555609 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 C21orf140B9A014 251 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 S100PP25815 95 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 SERF2P84101 59 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 SRYQ05066 204 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 PNRC1Q12796 327 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-209ENST00000555609 PMS2P11Q13670 270 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 DBX2Q6ZNG2 339 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 BATF2Q8N1L9 274 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 OR51M1Q9H341 326 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 OR51I2Q9H344 312 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 CISD1Q9NZ45 108 aaKnown RBP13.77□□□□□ -0.21
TUBB3-209ENST00000555609 LIPGQ9Y5X9 500 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 CACNA1HO95180 2353 aa13.77□□□□□ -0.21
TUBB3-209ENST00000555609 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 FAM90A26D6RGX4 464 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 ITGA3P26006 1051 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 TMEM217Q8N7C4 229 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 TTTY12Q9BZ98 90 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 LIN7CQ9NUP9 197 aaKnown RBP13.76□□□□□ -0.21
TUBB3-209ENST00000555609 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 IL36RNQ9UBH0 155 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 ERRFI1Q9UJM3 462 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-209ENST00000555609 A0A1B0GV50 99 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 MED19A0JLT2 244 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-209ENST00000555609 NDUFS6O75380 124 aaKnown RBP13.76□□□□□ -0.21
TUBB3-209ENST00000555609 NGFP01138 241 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 FABP1P07148 127 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 FOSL1P15407 271 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 HOXA5P20719 270 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 EPHA1P21709 976 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 GLIPR1P48060 266 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 HBG1P69891 147 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 HBG2P69892 147 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 DLK1P80370 383 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 HAGHQ16775 308 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 SLC25A24Q6NUK1 477 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 Q6P435 159 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 P2RX4Q99571 388 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
TUBB3-209ENST00000555609 RNF212BA8MTL3 300 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 SYNGR2O43760 224 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 CCL2P13500 99 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 CLN3Q13286 438 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 OR1C1Q15619 314 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 C9orf135Q5VTT2 229 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 RBMS3Q6XE24 437 aaKnown RBP13.75□□□□□ -0.21
TUBB3-209ENST00000555609 C20orf204Q6ZNR8 217 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 THNSL2Q86YJ6 484 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
TUBB3-209ENST00000555609 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
TUBB3-209ENST00000555609 RTL8AQ9BWD3 113 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 POLDIP2Q9Y2S7 368 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 MMP24Q9Y5R2 645 aa13.75□□□□□ -0.21
TUBB3-209ENST00000555609 SDK2Q58EX2 2172 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 ZNF503-AS2A6NEH8 195 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 HSPB6O14558 160 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 HS3ST1O14792 307 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 PSG2P11465 335 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 NQO2P16083 231 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 TGIF1Q15583 401 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 CYB561D1Q8N8Q1 229 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 ZBTB34Q8NCN2 500 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 FRYLO94915 3013 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 TNFSF12O43508 249 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 WNT5AP41221 380 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 RPS10P46783 165 aaKnown RBP13.74□□□□□ -0.21
TUBB3-209ENST00000555609 OR2B8PP59922 312 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 RUNX1Q01196 453 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 ELOBQ15370 118 aa13.74□□□□□ -0.21
TUBB3-209ENST00000555609 ZNF497Q6ZNH5 498 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms