RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CLEC2AQ6UVW9 174 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 OLIG3Q7RTU3 272 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 FAM19A3Q7Z5A8 133 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 BBOF1Q8ND07 529 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 SUN5Q8TC36 379 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 DOK4Q8TEW6 326 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 NELFBQ8WX92 580 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 SUCNR1Q9BXA5 334 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 C1QTNF6Q9BXI9 259 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 TM6SF2Q9BZW4 377 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 IQCGQ9H095 443 aaKnown RBP0.18□□□□□ -2.38
SNX6-204ENST00000555541 CRLF2Q9HC73 371 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 NCOA6Q14686 2063 aaPredicted RBP0.18□□□□□ -2.38
SNX6-204ENST00000555541 NSD2O96028 1365 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 IGKV2D-26A0A0A0MRZ7 120 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 TVP23AA6NH52 213 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 ANXA8P13928 327 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 PYCR1P32322 319 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 CBX5P45973 191 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 BSPH1Q075Z2 132 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 DEFB115Q30KQ5 88 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 ANXA8L1Q5VT79 327 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 GLT6D1Q7Z4J2 308 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 FBXO36Q8NEA4 188 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 OR11H1Q8NG94 326 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 OR10A6Q8NH74 314 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 APOL4Q9BPW4 351 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 CUL9Q8IWT3 2517 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 ADAMTSL1Q8N6G6 1762 aa0.17□□□□□ -2.38
SNX6-204ENST00000555541 ZNF532Q9HCE3 1301 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 TRBV6-5A0A0K0K1A5 114 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 C11orf86A6NJI1 115 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 GNRH2O43555 120 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 FGF4P08620 206 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 TUBG1P23258 451 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 ARR3P36575 388 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 DAOAP59103 153 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 ERHP84090 104 aaKnown RBP0.16□□□□□ -2.38
SNX6-204ENST00000555541 HOXC5Q00444 222 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 PSG3Q16557 428 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 MRPL51Q4U2R6 128 aaKnown RBP0.16□□□□□ -2.38
SNX6-204ENST00000555541 GID4Q8IVV7 300 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 ASCC1Q8N9N2 400 aaKnown RBP0.16□□□□□ -2.38
SNX6-204ENST00000555541 TBX5Q99593 518 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 PITX2Q99697 317 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 TUBG2Q9NRH3 451 aa0.16□□□□□ -2.38
SNX6-204ENST00000555541 PHLPP2Q6ZVD8 1323 aa0.15□□□□□ -2.38
SNX6-204ENST00000555541 LOC100653049A0A140TA62 436 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 FAM183AA6NL82 134 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 K7EN84 100 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 FGF16O43320 207 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 AKR7A2O43488 359 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 KRT34O76011 436 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 C1QCP02747 245 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 CTSEP14091 401 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 CPN2P22792 545 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 HSPA13P48723 471 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 RPL14P50914 215 aaKnown RBP0.15□□□□□ -2.39
SNX6-204ENST00000555541 MP68P56378 58 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 CLDN8P56748 225 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 RAB38P57729 211 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 RAB2AP61019 212 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 HBG1P69891 147 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 HBG2P69892 147 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 GUSBP1Q15486 140 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 ZNF514Q96K75 400 aaPredicted RBP0.15□□□□□ -2.39
SNX6-204ENST00000555541 Q96M85 177 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 MGLLQ99685 303 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 CDCA4Q9BXL8 241 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 BEX2Q9BXY8 128 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 EBPLQ9BY08 206 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 SCML1Q9UN30 329 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 KPTNQ9Y664 436 aa0.15□□□□□ -2.39
SNX6-204ENST00000555541 AQRO60306 1485 aaKnown RBP eCLIP0.15□□□□□ -2.396e-6■□□□□ 8.5
SNX6-204ENST00000555541 TMSB15BA0A087X1C1 80 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 NCF1BA6NI72 391 aaPredicted RBP0.14□□□□□ -2.39
SNX6-204ENST00000555541 NCF1CA8MVU1 366 aaPredicted RBP0.14□□□□□ -2.39
SNX6-204ENST00000555541 C2orf74A8MZ97 194 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 K7EQS6 105 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 PLA2G10O15496 165 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 SLC25A16P16260 332 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 IDH3GP51553 393 aaPredicted RBP0.14□□□□□ -2.39
SNX6-204ENST00000555541 BAXQ07812 192 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 NNATQ16517 81 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 RASL11AQ6T310 242 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 FAM19A1Q7Z5A9 133 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 LRRC28Q86X40 367 aaPredicted RBP0.14□□□□□ -2.39
SNX6-204ENST00000555541 OR9I1Q8NGQ6 314 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 ODF3Q96PU9 254 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 CHID1Q9BWS9 393 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 MND1Q9BWT6 205 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 SDHAF2Q9NX18 166 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 NEURL4Q96JN8 1562 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 BRWD1Q9NSI6 2320 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 LAMB4A4D0S4 1761 aa0.14□□□□□ -2.39
SNX6-204ENST00000555541 MYO5BQ9ULV0 1848 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 TMEM235A6NFC5 223 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 I3L4J1 428 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 UBFD1O14562 309 aaKnown RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms