RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 FBLN5Q9UBX5 448 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 SDCBPO00560 298 aaPredicted RBP10.95□□□□□ -0.66
SNX6-203ENST00000555416 SLC31A2O15432 143 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 SOCS1O15524 211 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 ORC5O43913 435 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 ARL6IP5O75915 188 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 BPNT1O95861 308 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 BLCAPP62952 87 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 LIAT1Q6ZQX7 453 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 OR51D1Q8NGF3 324 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 OR4C13Q8NGP0 309 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 KCNG3Q8TAE7 436 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 LPAR5Q9H1C0 372 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 GFOD1Q9NXC2 390 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 TRAPPC2LQ9UL33 140 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
SNX6-203ENST00000555416 TRDV1A0A1B0GX56 115 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 A0A1W2PPI3 338 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
SNX6-203ENST00000555416 HBZP02008 142 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 GLAP06280 429 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 PSMB9P28065 219 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 ZNF134P52741 427 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 GNMTQ14749 295 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 RAB11BQ15907 218 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 TMEM95Q3KNT9 176 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 PRR31Q5SQ13 230 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 HES5Q5TA89 166 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 C22orf42Q6IC83 251 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 Q8N2B8 174 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 PRR18Q8N4B5 295 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 OR10V1Q8NGI7 309 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 HDHD3Q9BSH5 251 aaPredicted RBP10.94□□□□□ -0.66
SNX6-203ENST00000555416 YTHDF1Q9BYJ9 559 aaKnown RBP10.94□□□□□ -0.66
SNX6-203ENST00000555416 NPFFR1Q9GZQ6 430 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 RANBP3Q9H6Z4 567 aaPredicted RBP10.94□□□□□ -0.66
SNX6-203ENST00000555416 ZNF696Q9H7X3 374 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 RAB18Q9NP72 206 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 MBNL3Q9NUK0 354 aaKnown RBP10.94□□□□□ -0.66
SNX6-203ENST00000555416 WNK1Q9H4A3 2382 aa10.94□□□□□ -0.66
SNX6-203ENST00000555416 A0A0B4J203 849 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 SMIM30A4D0T7 59 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 SH2D7A6NKC9 451 aaPredicted RBP10.93□□□□□ -0.66
SNX6-203ENST00000555416 FOXI3A8MTJ6 420 aaPredicted RBP10.93□□□□□ -0.66
SNX6-203ENST00000555416 TIMM23O14925 209 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 LDLRAD4O15165 306 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 AMY1AP04745 511 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 AMY2AP04746 511 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 ARSBP15848 533 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 BLVRBP30043 206 aaPredicted RBP10.93□□□□□ -0.66
SNX6-203ENST00000555416 CEACAM3P40198 252 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 REG1BP48304 166 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 TMEM50BP56557 158 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 ZNF773Q6PK81 442 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 SLC16A12Q6ZSM3 486 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 FAM89BQ8N5H3 189 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 DRAM1Q8N682 238 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 C11orf44Q8N8P7 122 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 ZNF439Q8NDP4 499 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 OR52M1Q8NGK5 317 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 OR56B4Q8NH76 319 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 CFHR4Q92496 578 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 TOMM40LQ969M1 308 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 RPEQ96AT9 228 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 NEDD4LQ96PU5 975 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 TAF9BQ9HBM6 251 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 V9GY05 133 aa10.93□□□□□ -0.66
SNX6-203ENST00000555416 TRAV1-2A0A0B4J238 106 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 CCRL2O00421 344 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 CA11O75493 328 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 MADCAM1Q13477 382 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 CT45A1Q5HYN5 189 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 OR2W3Q7Z3T1 314 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 KLHDC1Q8N7A1 406 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 OR52L2PQ8NGH6 319 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 OR2T6Q8NHC8 308 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 CT45A3Q8NHU0 189 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 ST6GALNAC6Q969X2 333 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 CREB3L1Q96BA8 519 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 PITPNC1Q9UKF7 332 aa10.92□□□□□ -0.66
SNX6-203ENST00000555416 AMMECR1Q9Y4X0 333 aaPredicted RBP10.92□□□□□ -0.66
SNX6-203ENST00000555416 IGHV3-72A0A0B4J1Y9 119 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 OOSP1A8MZH6 123 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 SPINT2O43291 252 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 NAPSAO96009 420 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 SNRNP70P08621 437 aaKnown RBP10.91□□□□□ -0.66
SNX6-203ENST00000555416 VSIG10L2P0DP72 767 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 BRS3P32247 399 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 VEGFCP49767 419 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 C6orf183Q5T699 404 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms