RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 TMEM14DPA8MWL7 114 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 BPNT1O95861 308 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 MPIG6BO95866 241 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 CGB3P0DN86 165 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 CGB7P0DN87 165 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 COX7A1P24310 79 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 SAA4P35542 130 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 UBA52P62987 128 aaKnown RBP11.58□□□□□ -0.56
SHMT2-217ENST00000555116 BAMBIQ13145 260 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 UNC119Q13432 240 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 ATAD3CQ5T2N8 411 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 BAIAP2L2Q6UXY1 529 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 Q6YL49 198 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 LIN7BQ9HAP6 207 aa11.58□□□□□ -0.56
SHMT2-217ENST00000555116 MMP23AO75900 390 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 CLDN12P56749 244 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 PITPNAQ00169 270 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 RAB11BQ15907 218 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 HACD4Q5VWC8 232 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 SLC35E4Q6ICL7 350 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 CYYR1Q96J86 154 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 SPACA1Q9HBV2 294 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 OR6C3Q9NZP0 311 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 FAM240BA0A1B0GVZ2 78 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 CLDN34H7C241 214 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 TRIM77I1YAP6 450 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 MELTFP08582 738 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 GDNFP39905 211 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 RPS27AP62979 156 aaKnown RBP11.57□□□□□ -0.56
SHMT2-217ENST00000555116 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 NDUFA5Q16718 116 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 C17orf58Q2M2W7 97 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 MIDNQ504T8 468 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 RAB12Q6IQ22 244 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 PLET1Q6UQ28 207 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 SLC25A38Q96DW6 304 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 DUX5Q96PT3 197 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 TM2D1Q9BX74 207 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 TMEM59Q9BXS4 323 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 GAL3ST2Q9H3Q3 398 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 RABL2AQ9UBK7 228 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-217ENST00000555116 RABL2BQ9UNT1 228 aa11.57□□□□□ -0.56
SHMT2-217ENST00000555116 MRPS7Q9Y2R9 242 aaKnown RBP11.57□□□□□ -0.56
SHMT2-217ENST00000555116 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-217ENST00000555116 S100A1P23297 94 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 CFPP27918 469 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 DGCR2P98153 550 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 OR2W3Q7Z3T1 314 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-217ENST00000555116 OR11H6Q8NGC7 330 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 C19orf24Q9BVV8 132 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 ABCG5Q9H222 651 aa11.56□□□□□ -0.56
SHMT2-217ENST00000555116 TRAV39A0A0B4J263 110 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 A0A0B4J293 547 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 KBTBD11-OT1A0A1B0GTJ5 212 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CTDSPLO15194 276 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 HOXA3O43365 443 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-217ENST00000555116 GSTZ1O43708 216 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-217ENST00000555116 PDCD6O75340 191 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 GLAP06280 429 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ARSBP15848 533 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FUT3P21217 361 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CDK2P24941 298 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 GLP1RP43220 463 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ZNF497Q6ZNH5 498 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 IZUMO1Q8IYV9 350 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 OR51D1Q8NGF3 324 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 NEK7Q8TDX7 302 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FAM3DQ96BQ1 224 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 TMEM133Q9H2Q1 129 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 LINC00574Q9H8X3 128 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ZMAT3Q9HA38 289 aaKnown RBP11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FBLN5Q9UBX5 448 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FAM96BQ9Y3D0 163 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ETV7Q9Y603 341 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 A0A0A6YYD4 124 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 MCRIP1C9JLW8 97 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 LDLRAD4O15165 306 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CCNKO75909 580 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 MT-ND4P03905 459 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 FBP1P09467 338 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CD3GP09693 182 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CHATP28329 748 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 RBM39Q14498 530 aaKnown RBP11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms