RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 HEXA-AS1Q9H8Q6 139 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 IDI2-AS1Q9NZ38 188 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 ANAPC10Q9UM13 185 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 MALRD1Q5VYJ5 2156 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 IGKV1D-8A0A087WSZ0 117 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 A0A087X0M5 115 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 A0A1B0GX30 115 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 FABP7O15540 132 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 MMP23AO75900 390 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 DIRAS3O95661 229 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 AVPP01185 164 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 CTXN2P0C2S0 81 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF16P17020 682 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-215ENST00000554997 OMGP23515 440 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 SSTR5P35346 364 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 LOXL3P58215 753 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 SSBP1Q04837 148 aaKnown RBP8.35□□□□□ -1.07
SYNE2-215ENST00000554997 TMEM30BQ3MIR4 351 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 VMO1Q7Z5L0 202 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 PRR18Q8N4B5 295 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 GVQW1Q8N7I0 195 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 BEST4Q8NFU0 473 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 OR4A4PQ8NGN8 299 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 OR52I2Q8NH67 350 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 OR1L1Q8NH94 360 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 SMIM4Q8WVI0 70 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 S100ZQ8WXG8 99 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 GCDHQ92947 438 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-215ENST00000554997 TNFRSF14Q92956 283 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 KIRREL1Q96J84 757 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 SMR3AQ99954 134 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 PCGF1Q9BSM1 259 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 THAP7Q9BT49 309 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-215ENST00000554997 TMEM133Q9H2Q1 129 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 KLK11Q9UBX7 282 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 MTFP1Q9UDX5 166 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 ANXA10Q9UJ72 324 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 KCNS2Q9ULS6 477 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
SYNE2-215ENST00000554997 FLNAP21333 2647 aaKnown RBP8.35□□□□□ -1.07
SYNE2-215ENST00000554997 MEIS3P1A6NDR6 274 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 A8MV72 311 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-215ENST00000554997 SDCBPO00560 298 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-215ENST00000554997 ZBTB25P24278 435 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 CD34P28906 385 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 GDNFP39905 211 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 HLA-DRB3P79483 266 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 DGCR2P98153 550 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF79Q15937 498 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 PRAMEF5Q5TYX0 476 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 STEAP3Q658P3 488 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 NCR3LG1Q68D85 454 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 C1orf229Q6ZS94 237 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-215ENST00000554997 Q8N402 240 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 MFSD4AQ8N468 514 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 TEX29Q8N6K0 151 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 OR5AP2Q8NGF4 316 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 OR13D1Q8NGV5 346 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 MAFIPQ8WZ33 124 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 TOLLIPQ9H0E2 274 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 AKIP1Q9NQ31 210 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 IFT46Q9NQC8 304 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 OR2S2Q9NQN1 319 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 TAS2R8Q9NYW2 309 aa8.34□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF107Q9UII5 783 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-215ENST00000554997 RBMX2Q9Y388 322 aaKnown RBP8.34□□□□□ -1.07
SYNE2-215ENST00000554997 ACANP16112 2415 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 TRBV6-7A0A0A0MS04 114 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 IGKV1-6A0A0C4DH72 117 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 CENPVL3A0A0U1RRI6 287 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 YPEL1O60688 119 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 RGS11O94810 467 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 NFYBP25208 207 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 RCVRNP35243 200 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 CEACAM6P40199 344 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 UBE2E1P51965 193 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 PRRX1P54821 245 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 BPIFB3P59826 476 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 ACTBP60709 375 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 ACTG1P63261 375 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 LSAMPQ13449 338 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 HERPUD1Q15011 391 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 Q3ZCU0 254 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 CHRFAM7AQ494W8 412 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 MORN2Q502X0 79 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 IGSF11Q5DX21 431 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 HCP5Q6MZN7 132 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 CLEC9AQ6UXN8 241 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 ABHD12Q8N2K0 398 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 C8orf31Q8N9H6 132 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms