RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RBMXL1Q96E39 390 aaKnown RBP8.14□□□□□ -1.11
SYNE2-213ENST00000554805 C1QTNF5Q9BXJ0 243 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 PLK3Q9H4B4 646 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 SMDT1Q9H4I9 107 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 SEBOXQ9HB31 216 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-213ENST00000554805 BOKQ9UMX3 212 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-213ENST00000554805 FREM1Q5H8C1 2179 aa8.14□□□□□ -1.11
SYNE2-213ENST00000554805 DIDO1Q9BTC0 2240 aaKnown RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PINLYPA6NC86 204 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 LRRC3CA6NJW4 275 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 MMP7P09237 267 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 TUBG1P23258 451 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 F2RP25116 425 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PMELP40967 661 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 CD200P41217 278 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 HLA-DRB3P79483 266 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 APOBEC3DQ96AK3 386 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 THOC3Q96J01 351 aaKnown RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PRDM14Q9GZV8 571 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF665Q9H7R5 613 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 GAR1Q9NY12 217 aaKnown RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PPP1R2P9O14990 202 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 DEGS1O15121 323 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 WDR1O75083 606 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 TRGC2P03986 189 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 ABLIM2Q6H8Q1 611 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF552Q9H707 407 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 SH2D2AQ9NP31 389 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 ATP23Q9Y6H3 246 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 IGKV1-6A0A0C4DH72 117 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 A0A0G2JRQ6 117 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 SIRPB1O00241 398 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 CYTIPO60759 359 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 TUSC2O75896 110 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 HSPB1P04792 205 aaKnown RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 MDKP21741 143 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 CEACAM21Q3KPI0 293 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 NMSQ5H8A3 153 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF506Q5JVG8 444 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 OR2T2Q6IF00 324 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PPP1R32Q7Z5V6 425 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 MALSU1Q96EH3 234 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 SIGLEC12Q96PQ1 595 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
SYNE2-213ENST00000554805 OR14J1Q9UGF5 321 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 TRAPPC2LQ9UL33 140 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 TCFL5Q9UL49 500 aa8.13□□□□□ -1.11
SYNE2-213ENST00000554805 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 A0A1B0GW64 132 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 H0Y980 276 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 CELA3AP09093 270 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 MAS1LP35410 378 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 Q0VFX4 171 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 C3AR1Q16581 482 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 DCAF12Q5T6F0 453 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR8G2PQ6IF36 304 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM58AQ8N1B3 248 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR5D13Q8NGL4 314 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR1K1Q8NGR3 316 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 C12orf49Q9H741 205 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 RPRMQ9NS64 109 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 PILRBQ9UKJ0 227 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR2W1Q9Y3N9 320 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 RBMXL2O75526 392 aaKnown RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 NAPSAO96009 420 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 BTF3P20290 206 aaKnown RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 HOXA5P20719 270 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 CA6P23280 308 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 APLNRP35414 380 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 LINC00696Q6ZRV3 163 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR1A1Q9P1Q5 309 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 DUXBA0A1W2PPF3 345 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A10PA6NDY2 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A18PA6NE21 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A16PA6NEW6 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A20PA6NIJ5 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A8PA6NJQ4 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A7PA6NKC0 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A22PA8MWA6 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A12PA8MX19 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A5PA8MXJ8 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A23PA8MXZ1 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 IGHEP01854 428 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A15PP0C7V4 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A13PP0C7W8 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A14PP0C7W9 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM90A24PP0C7X0 464 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 ELOBQ15370 118 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 KHDC3LQ587J8 217 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR2B11Q5JQS5 317 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 ABHD17BQ5VST6 288 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms