RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CDKN2DP55273 166 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 DSCR4P56555 118 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CARD18P57730 90 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ADARB1P78563 741 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 REEP5Q00765 189 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 GUSBP1Q15486 140 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TSNQ15631 228 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNHIT3Q15649 155 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TOMM34Q15785 309 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZSCAN26Q16670 478 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 DEFB116Q30KQ4 102 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SPRNQ5BIV9 151 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TIMM23BQ5SRD1 257 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 HES5Q5TA89 166 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF691Q5VV52 312 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CARD17Q5XLA6 110 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NPSR1Q6W5P4 371 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZFP2Q6ZN57 461 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TEX43Q6ZNM6 134 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 Q6ZSR3 168 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OLIG3Q7RTU3 272 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 HDDC2Q7Z4H3 204 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SAXO1Q8IYX7 474 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RIBC1Q8N443 379 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 DEFB108BQ8NET1 73 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR2M3Q8NG83 312 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR10G4Q8NGN3 311 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR8K3Q8NH51 312 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR4S2Q8NH73 311 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR2V1Q8NHB1 315 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF502Q8TBZ5 544 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SLC7A13Q8TCU3 470 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ACMSDQ8TDX5 336 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 HGDQ93099 445 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 APH1AQ96BI3 265 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC45Q96CN5 670 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SERPINB12Q96P63 405 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 VAT1Q99536 393 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SLC29A1Q99808 456 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 EBPLQ9BY08 206 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 FAM192AQ9GZU8 254 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RACGAP1Q9H0H5 632 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR51M1Q9H341 326 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CENPHQ9H3R5 247 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CXorf21Q9HAI6 301 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NOX3Q9HBY0 568 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SIRT7Q9NRC8 400 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SLC17A7Q9P2U7 560 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OPN4Q9UHM6 478 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RPUSD1Q9UJJ7 312 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PITPNC1Q9UKF7 332 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NOSIPQ9Y314 301 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 IGKV2D-24A0A075B6R9 120 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV3-66A0A0C4DH42 116 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV1-69-2A0A0G2JMI3 117 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 INS-IGF2F8WCM5 200 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 C3orf84H3BNL1 204 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 TRAPPC2LH3BP13 241 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 MRPL33O75394 65 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 MED6O75586 246 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 OR2J3O76001 311 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CLPXO76031 633 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 RAB3DO95716 219 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 SERPINA5P05154 406 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 KLK1P06870 262 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CD28P10747 220 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CD79AP11912 226 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 GZMAP12544 262 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF14P17017 642 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 RRM2P31350 389 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 XKP51811 444 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 UBE2NP61088 152 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 SARNPP82979 210 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 IRF8Q02556 426 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 KLRD1Q13241 179 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 TFDP2Q14188 446 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 EBI3Q14213 229 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 GINS1Q14691 196 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 PTGES3Q15185 160 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 RCN1Q15293 331 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 MRPL23Q16540 153 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 POU2AF1Q16633 256 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 LY6G6FQ5SQ64 297 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 FAM201AQ5SY85 155 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 FBXW9Q5XUX1 488 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 METAP1DQ6UB28 335 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 C10orf99Q6UWK7 81 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CYHR1Q6ZMK1 362 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CCDC121Q6ZUS5 278 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 BZW1Q7L1Q6 419 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 GTPBP8Q8N3Z3 284 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 FAM86B1Q8N7N1 296 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF615Q8N8J6 731 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 BBOF1Q8ND07 529 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 OR4C5Q8NGB2 326 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF420Q8TAQ5 688 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 NT5CQ8TCD5 201 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 C1orf54Q8WWF1 131 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 SLC38A4Q969I6 547 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms