RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 OR10X1Q8NGY0 326 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 ASB17Q8WXJ9 295 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 FLYWCH2Q96CP2 140 aaKnown RBP3.68□□□□□ -1.82
ATXN3-229ENST00000554672 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 RITA1Q96K30 269 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 BTBD10Q9BSF8 475 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 YIPF3Q9GZM5 350 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 NCOR1P1Q9H4R4 102 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 EXOSC4Q9NPD3 245 aaKnown RBP3.68□□□□□ -1.82
ATXN3-229ENST00000554672 ARMC1Q9NVT9 282 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
ATXN3-229ENST00000554672 TAS2R1Q9NYW7 299 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 IDI2-AS1Q9NZ38 188 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
ATXN3-229ENST00000554672 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 PSG11Q9UQ72 335 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 MRPS28Q9Y2Q9 187 aaKnown RBP3.68□□□□□ -1.82
ATXN3-229ENST00000554672 TMEM14AQ9Y6G1 99 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-229ENST00000554672 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 NPIPB11E5RHQ5 1161 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HSD17B6O14756 317 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 DEGS1O15121 323 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 SNX3O60493 162 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 GATBO75879 557 aaKnown RBP3.67□□□□□ -1.82
ATXN3-229ENST00000554672 SOX14O95416 240 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HSPB1P04792 205 aaKnown RBP3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HMGN1P05114 100 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CALCBP10092 127 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 COX4I1P13073 169 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HSD17B1P14061 328 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 BCL3P20749 454 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HTR1FP30939 366 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 RBP2P50120 134 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 F2RL1P55085 397 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 PSME3P61289 254 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 SCN1BQ07699 218 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 BCL2L15Q5TBC7 163 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-229ENST00000554672 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 RPP25LQ8N5L8 163 aaKnown RBP3.67□□□□□ -1.82
ATXN3-229ENST00000554672 AQP11Q8NBQ7 271 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CHST4Q8NCG5 386 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CCDC54Q8NEL0 328 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 DNAAF1Q8NEP3 725 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 TEX47Q8TBZ9 253 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 LEAP2Q969E1 77 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CMTM5Q96DZ9 223 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 COQ2Q96H96 371 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 HSPB9Q9BQS6 159 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 OSBPL10Q9BXB5 764 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 DGCR6LQ9BY27 220 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 BARHL1Q9BZE3 327 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 MOB1AQ9H8S9 216 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 PLEKHA1Q9HB21 404 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 RHOFQ9HBH0 211 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 KIAA1456Q9P272 454 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 IL36RNQ9UBH0 155 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 ZNF107Q9UII5 783 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-229ENST00000554672 OR52A1Q9UKL2 312 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 IKZF2Q9UKS7 526 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 ERGIC3Q9Y282 383 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 GSTK1Q9Y2Q3 226 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 SNX5Q9Y5X3 404 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 WSB1Q9Y6I7 421 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 CEPT1Q9Y6K0 416 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 R4GMQ9 66 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 V9GYQ6 96 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 SORL1Q92673 2214 aa3.67□□□□□ -1.82
ATXN3-229ENST00000554672 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 A0A087WW49 117 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 MEIKINA0A087WXM9 373 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 A0A1W2PPE3 182 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 G3V318 75 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 H3BN98 237 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 SLC33A1O00400 549 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 SYT7O43581 403 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 SRSF10O75494 262 aaKnown RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 CNIH1O95406 144 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 IL1AP01583 271 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 LGALS1P09382 135 aaKnown RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 ZNF44P15621 663 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 CCL1P22362 96 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 PRKACBP22694 351 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 IL3RAP26951 378 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms