RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MEOX1P50221 254 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SLC18A1P54219 525 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RAB5BP61020 215 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TIAL1Q01085 375 aaKnown RBP eCLIP2.29□□□□□ -2.049e-7■■■■□ 23.8
PRPF39-206ENST00000554429 RGS1Q08116 209 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GGTLC2Q14390 218 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RNASE12Q5GAN4 147 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM74A1Q5RGS3 127 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HECTD2Q5U5R9 776 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 NXNL2Q5VZ03 156 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM268Q5VZI3 342 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR4A47Q6IF82 309 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 PRR27Q6MZM9 219 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF343Q6P1L6 599 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 PQLC2Q6ZP29 291 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TCF24Q7RTU0 167 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM179BQ7Z7N9 219 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RPS19BP1Q86WX3 136 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 SLC35F2Q8IXU6 374 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 APCDD1LQ8NCL9 501 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MORN4Q8NDC4 146 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 OR4C13Q8NGP0 309 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H2ACQ93077 130 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 RNASE6Q93091 150 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H2BAQ96A08 127 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 UPRTQ96BW1 309 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 GALMQ96C23 342 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 LINC00052Q96N35 136 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF649Q9BS31 505 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MARVELD1Q9BSK0 173 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TXNIPQ9H3M7 391 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 MAGIXQ9H6Y5 334 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 NANOGQ9H9S0 305 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 LRTM1Q9HBL6 345 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 ADGRL4Q9HBW9 690 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 A4GALTQ9NPC4 353 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 KCNJ16Q9NPI9 418 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM206AQ9NX38 181 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 TECRQ9NZ01 308 aaKnown RBP2.29□□□□□ -2.04
PRPF39-206ENST00000554429 HSPB8Q9UJY1 196 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 FAM215AQ9Y5M1 114 aa2.29□□□□□ -2.04
PRPF39-206ENST00000554429 CREBBPQ92793 2442 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C2CD3Q4AC94 2353 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SRRM4A7MD48 611 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MPTX1A8MV57 137 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 A8MWP6 167 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CDC40O60508 579 aaKnown RBP eCLIP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TRAPPC6AO75865 159 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 WISP2O76076 250 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 THY1P04216 161 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C8orf88P0DMB2 117 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 KLK2P20151 261 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TBPP20226 339 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RPL3P39023 403 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ZFP36L2P47974 494 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RORCP51449 518 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DEFA3P59666 94 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RAB8AP61006 207 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RPL8P62917 257 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RAB40BQ12829 278 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 GUSBP1Q15486 140 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NSDHLQ15738 373 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DEFB113Q30KQ7 82 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 UNC50Q53HI1 259 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DCST2Q5T1A1 773 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 HIST2H2AA3Q6FI13 130 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 GLYATQ6IB77 296 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 HAGHLQ6PII5 290 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 BCDIN3DQ7Z5W3 292 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MOB3BQ86TA1 216 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NAA40Q86UY6 237 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NIT1Q86X76 327 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR8I2Q8N0Y5 310 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 KLHDC1Q8N7A1 406 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 PRR26Q8N8Z3 221 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DMBX1Q8NFW5 382 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR7A2PQ8NGA2 310 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR52E4Q8NGH9 312 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR14A16Q8NHC5 309 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C11orf45Q8TAV5 145 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TWIST2Q8WVJ9 160 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SSMEM1Q8WWF3 244 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RGP1Q92546 391 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TAAR8Q969N4 342 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 LRRC58Q96CX6 371 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 EFCAB11Q9BUY7 163 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TAPBPLQ9BX59 468 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C1QTNF6Q9BXI9 259 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CHIAQ9BZP6 476 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DCSTAMPQ9H295 470 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MS4A6AQ9H2W1 248 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF385DQ9H6B1 395 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NIPAL2Q9H841 368 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 PLEKHF2Q9H8W4 249 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 GALNT9Q9HCQ5 603 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 VPS29Q9UBQ0 182 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms