RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 RCE1Q9Y256 329 aa4.56□□□□□ -1.68
ATXN3-226ENST00000554350 MRPS7Q9Y2R9 242 aaKnown RBP4.56□□□□□ -1.68
ATXN3-226ENST00000554350 TRAV6A0A075B6T7 132 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 TRAV8-7A0A075B6U6 113 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 HMSDA8MTL9 139 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 C11orf98E9PRG8 122 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CREBL2O60519 120 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 VAMP5O95183 116 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CD74P04233 296 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ALDOBP05062 364 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 SPARCP09486 303 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 WNT2P09544 360 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 AKAIN1P0CW23 69 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 TBPP20226 339 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CHATP28329 748 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 HTR2CP28335 458 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 LAP3P28838 519 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 PRSS3P35030 304 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 POU3F4P49335 361 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 TAS2R19P59542 299 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 LSM6P62312 80 aaKnown RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 TNFAIP6P98066 277 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 EIF2B1Q14232 305 aaKnown RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 HIST3H3Q16695 136 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CEACAM16Q2WEN9 425 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 C2orf76Q3KRA6 126 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 Q5BKY6 102 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 KHDC1LQ5JSQ8 128 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 PXDC1Q5TGL8 231 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 Q6ZSR3 168 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 PRSS45Q7RTY3 260 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 SERPINA12Q8IW75 414 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CCDC36Q8IYA8 594 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ELMOD2Q8IZ81 293 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 GPR137CQ8N3F9 429 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ZIC4Q8N9L1 334 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 OR5R1Q8NH85 324 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ANGPTL6Q8NI99 470 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CCDC107Q8WV48 283 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 TSEN15Q8WW01 171 aaKnown RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 GIMAP1Q8WWP7 306 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 C10orf35Q96D05 121 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 SLC25A44Q96H78 314 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 OXGR1Q96P68 337 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ZNF436Q9C0F3 470 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 C1orf198Q9H425 327 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CDH20Q9HBT6 801 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 SLC2A8Q9NY64 477 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 ZNRD1Q9P1U0 126 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 GHRLQ9UBU3 117 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 KLK11Q9UBX7 282 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CLN8Q9UBY8 286 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 CYB5R1Q9UHQ9 305 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 OR52A1Q9UKL2 312 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 RAB22AQ9UL26 194 aa4.55□□□□□ -1.68
ATXN3-226ENST00000554350 LSM4Q9Y4Z0 139 aaKnown RBP4.55□□□□□ -1.68
ATXN3-226ENST00000554350 IGLV3-9A0A075B6K5 115 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 A0A0B4J203 849 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 TMEM269A0A1B0GVZ9 245 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 A0A1W2PRD5 423 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 A0A1W2PRF3 423 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 A0A1W2PRM7 423 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 LINC00862A6NCI5 91 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 METTL21EPA6NDL7 271 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 A6NIN4 97 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 H3BUX3 64 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 H7C1C5 153 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 PSMD9O00233 223 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 GMDSO60547 372 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 IFNA7P01567 189 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 IGHG1P01857 330 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 APOC1P02654 83 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 MT-ND4P03905 459 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 MAS1P04201 325 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 GRPP07492 148 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 H2BFMP0C1H6 154 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 UBBP0CG47 229 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 CCL2P13500 99 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 ZNF250P15622 560 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 HLA-GP17693 338 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 CCL1P22362 96 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 RCVRNP35243 200 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 SOX2P48431 317 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 P2RY4P51582 365 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 CCR6P51684 374 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 LCN6P62502 163 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 H3F3AP84243 136 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 MEF2DQ14814 521 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 ARL6IP1Q15041 203 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 OR7A5Q15622 319 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 SPRNQ5BIV9 151 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 CLVS2Q5SYC1 327 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 ZNF774Q6NX45 483 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 LPCAT3Q6P1A2 487 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 SLC25A47Q6Q0C1 308 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 TEX261Q6UWH6 196 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 ZNF813Q6ZN06 617 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 FOXL2NBQ6ZUU3 175 aa4.54□□□□□ -1.68
ATXN3-226ENST00000554350 PGAP1Q75T13 922 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms