RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 C5orf64Q2M2E5 130 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 MPV17L2Q567V2 206 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ZNF467Q7Z7K2 595 aaPredicted RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 HAPLN4Q86UW8 402 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 OR2Y1Q8NGV0 311 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 KLHDC7BQ96G42 594 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 PSMG3Q9BT73 122 aaPredicted RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 RTN4RQ9BZR6 473 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 RARRES3Q9UL19 164 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ADAMTS9Q9P2N4 1935 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 KIAA1549Q9HCM3 1950 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ATG2BQ96BY7 2078 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 GTF3C1Q12789 2109 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 THADAQ6YHU6 1953 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 BLACEA4D250 179 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 FOXS1O43638 330 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 NKX2-2O95096 273 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ADH1BP00325 375 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 GLI4P10075 376 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 CPMP14384 443 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 HMGA1P17096 107 aaKnown RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 PAX9P55771 341 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 SMAD3P84022 425 aaKnown RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 C17orf67Q0P5P2 114 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ABCA11PQ4W5N1 156 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 PHLDA2Q53GA4 152 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 FIGLAQ6QHK4 219 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 WDR82Q6UXN9 313 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 OR2A1Q8NGT9 310 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 GUCD1Q96NT3 240 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ZNF286AQ9HBT8 521 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 PNO1Q9NRX1 252 aaKnown RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 POLR1DQ9Y2S0 133 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 B3GALT1Q9Y5Z6 326 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 TRAV9-2A0A087WT02 112 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 TRAPPC2LH3BP13 241 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 K7ESM1 405 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 SIRPB1O00241 398 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 HCRTR1O43613 425 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 TTRP02766 147 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 POU2F2P09086 479 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CCR2P41597 374 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 AMTP48728 403 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 TLE1Q04724 770 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 IGFBP7Q16270 282 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 HIST3H3Q16695 136 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
SIX4-202ENST00000554079 ZNF479Q96JC4 524 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 FBRSQ9HAH7 460 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 GNB4Q9HAV0 340 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 OR51B2Q9Y5P1 312 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
SIX4-202ENST00000554079 MUC21A0A0G2JKD1 596 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 MUC21A0A140T8X8 626 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 A0A1W2PS18 150 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 PHF1O43189 567 aaPredicted RBP8.19□□□□□ -1.1
SIX4-202ENST00000554079 CD5LO43866 347 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 S1PR2O95136 353 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CA2P00918 260 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 IFNA5P01569 189 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CELA3BP08861 270 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 IGLL1P15814 213 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 NPPCP23582 126 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CTSSP25774 331 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 UCP1P25874 307 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 CD52P31358 61 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 RELBQ01201 579 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 EGR4Q05215 589 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 SLAQ13239 276 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 PDGFRLQ15198 375 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 ZNF141Q15928 474 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 MUC21Q5SSG8 566 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 STUMQ69YW2 141 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 ASTLQ6HA08 431 aaPredicted RBP8.19□□□□□ -1.1
SIX4-202ENST00000554079 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 C17orf99Q6UX52 265 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 ATG4DQ86TL0 474 aaPredicted RBP8.19□□□□□ -1.1
SIX4-202ENST00000554079 SGMS2Q8NHU3 365 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 OR5P3Q8WZ94 311 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 SFRP2Q96HF1 295 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 HDAC8Q9BY41 377 aa8.19□□□□□ -1.1
SIX4-202ENST00000554079 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 CXorf51AA0A1B0GTR3 108 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 LOC102725191A0A1B0GVB3 256 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 H0YJW9 148 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 RAB29O14966 203 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 TMPRSS2O15393 492 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 TNFSF12O43508 249 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 MT-CO2P00403 227 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 CT62P0C5K7 136 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 CTLA4P16410 223 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 PSMB3P49720 205 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms