RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TRAV20A0A0B4J274 112 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 IGHV2-70DA0A0C4DH43 119 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 F2RL2O00254 374 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 PHF1O43189 567 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-210ENST00000553950 HSPA12AO43301 675 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 LANCL1O43813 399 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 FCN3O75636 299 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 HBZP02008 142 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 CD3DP04234 171 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 ZBTB25P24278 435 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 FPR2P25090 351 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 HLA-DMAP28067 261 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 SSTR5P35346 364 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 GZMKP49863 264 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 ASAH1Q13510 395 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF273Q14593 569 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 Q3ZCU0 254 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 TMEM200BQ69YZ2 307 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 HEPN1Q6WQI6 88 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 LYSMD2Q8IV50 215 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 PRR18Q8N4B5 295 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 SLC2A8Q9NY64 477 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 EHFQ9NZC4 300 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
SHMT2-210ENST00000553950 C22orf46C9J442 243 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 C15orf65H3BRN8 121 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 LYRM1O43325 122 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 MSMBP08118 114 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 ERVFRD-1P60508 538 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 TSPAN5P62079 268 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 Q6ZPA2 131 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 C1orf122Q6ZSJ8 110 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 LINC01356Q8N9X3 169 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 OR4C16Q8NGL9 310 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 EDARADDQ8WWZ3 215 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 KIRREL1Q96J84 757 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 IDI2-AS1Q9NZ38 188 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 COPZ2Q9P299 210 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 GNG12Q9UBI6 72 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF69Q9UC07 566 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 SLC23A1Q9UHI7 598 aa11.96□□□□□ -0.49
SHMT2-210ENST00000553950 ABCA2Q9BZC7 2435 aa11.96□□□□□ -0.5
SHMT2-210ENST00000553950 TRBV6-7A0A0A0MS04 114 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-210ENST00000553950 AMY2AP04746 511 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 SCTP09683 121 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 GSTT2P0CG29 244 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 OR5H8P0DN80 308 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 CGB3P0DN86 165 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 CGB7P0DN87 165 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 HERV-K104P61576 105 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 LCN2P80188 198 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 LY6G6FQ5SQ64 297 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 METTL11BQ5VVY1 283 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 OVCH2Q7RTZ1 564 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 GLCCI1Q86VQ1 547 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 FGFRL1Q8N441 504 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 METTL8Q9H825 291 aaKnown RBP11.95□□□□□ -0.5
SHMT2-210ENST00000553950 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 MCUBQ9NWR8 336 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 TACC2O95359 2948 aa11.95□□□□□ -0.5
SHMT2-210ENST00000553950 C17orf98A8MV24 154 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 BET1O15155 118 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 PTTG1O95997 202 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 PMP2P02689 132 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 FCER2P06734 321 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 C17orf58Q2M2W7 97 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 ZNF782Q6ZMW2 699 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-210ENST00000553950 OR6F1Q8NGZ6 308 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 OR1L1Q8NH94 360 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 OR2S2Q9NQN1 319 aa11.94□□□□□ -0.5
SHMT2-210ENST00000553950 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 TRAV39A0A0B4J263 110 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 J3QLI3 93 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 M0QYG6 137 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 ITGB1BP1O14713 200 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 YPEL1O60688 119 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 IGHV1-8P0DP01 117 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 CCL3L1P16619 93 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 RFX2P48378 723 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 RAB7AP51149 207 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 DLX6P56179 175 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 HERPUD1Q15011 391 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 RBMS2Q15434 407 aaKnown RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 RGS21Q2M5E4 152 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms