RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 TVP23BQ9NYZ1 205 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 A0A1W2PN81 502 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 METTL15A6NJ78 407 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 SDCBPO00560 298 aaPredicted RBP6.85□□□□□ -1.31
PRKCH-208ENST00000553846 KRT8P05787 483 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 CSN3P07498 182 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 SNRPBP14678 240 aaKnown RBP6.85□□□□□ -1.31
PRKCH-208ENST00000553846 FSTP19883 344 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 CHRNA7P36544 502 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 NANOS3P60323 173 aaKnown RBP6.85□□□□□ -1.31
PRKCH-208ENST00000553846 MS4A2Q01362 244 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 LRRC36Q1X8D7 754 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 NXNL2Q5VZ03 156 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 FDX2Q6P4F2 183 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 ADGRG5Q8IZF4 528 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 TCTEX1D1Q8N7M0 179 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 OR9G4Q8NGQ1 327 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 OR13C9Q8NGT0 318 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 OR2G2Q8NGZ5 317 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 UBALD1Q8TB05 177 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 RSRP1Q9BUV0 290 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 TMED9Q9BVK6 235 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 ELOVL1Q9BW60 279 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 BARHL1Q9BZE3 327 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 PLEKHA3Q9HB20 300 aa6.85□□□□□ -1.31
PRKCH-208ENST00000553846 IGHV3-43A0A0B4J1X8 118 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 H0Y980 276 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 NBR2O15453 112 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ORC5O43913 435 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 IGHV3-43DP0DP04 118 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 RAP2AP10114 183 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 DBTP11182 482 aaKnown RBP6.84□□□□□ -1.31
PRKCH-208ENST00000553846 GZMHP20718 246 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 PRKACGP22612 351 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 EPHA2P29317 976 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ALDH3A2P51648 485 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 CX3CL1P78423 397 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ZNF85Q03923 595 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 KISS1Q15726 138 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ECSCRQ19T08 205 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 NHLRC3Q5JS37 347 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ZNF529Q6P280 563 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 FAHD1Q6P587 224 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ASCL4Q6XD76 172 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 GTSCR1Q86UQ5 136 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 DEFB107AQ8IZN7 70 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 GAPTQ8N292 157 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 Q8N402 240 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 SUMF2Q8NBJ7 301 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 PXT1Q8NFP0 134 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ARL11Q969Q4 196 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
PRKCH-208ENST00000553846 TBX5Q99593 518 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 OVOL2Q9BRP0 275 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 DPCDQ9BVM2 203 aaPredicted RBP6.84□□□□□ -1.31
PRKCH-208ENST00000553846 MRPL20Q9BYC9 149 aaKnown RBP6.84□□□□□ -1.31
PRKCH-208ENST00000553846 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 GAB2Q9UQC2 676 aa6.84□□□□□ -1.31
PRKCH-208ENST00000553846 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 NUPR2A6NF83 97 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 CST1P01037 141 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 OR2T7P0C7T2 308 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 IL3RAP26951 378 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 CRISP1P54107 249 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 SSBP2P81877 361 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 PTGES3Q15185 160 aaKnown RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 FAM98BQ52LJ0 330 aaKnown RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 C12orf73Q69YU5 71 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF660Q6AZW8 331 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 LCN12Q6JVE5 192 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 PYHIN1Q6K0P9 492 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 LIN54Q6MZP7 749 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 CEMP1Q6PRD7 247 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF497Q6ZNH5 498 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 TMEM163Q8TC26 289 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 CST11Q9H112 138 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 ARL8BQ9NVJ2 186 aa6.83□□□□□ -1.32
PRKCH-208ENST00000553846 ARGLU1Q9NWB6 273 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 CNOT2Q9NZN8 540 aaKnown RBP6.83□□□□□ -1.32
PRKCH-208ENST00000553846 TMEM30CPA0ZSE6 113 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 OR4C45A6NMZ5 311 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZAR1LA6NP61 321 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF785A8K8V0 405 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 GABRPO00591 440 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 FCN1O00602 326 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 MT-ND4P03905 459 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 CD7P09564 240 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ANXA8P13928 327 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF20P17024 532 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZP3P21754 424 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 PRR20EP86478 221 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms