RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 OR10D3Q8NH80 312 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 PP6455Q8WZ26 134 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 CABLES2Q9BTV7 478 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 TM2D1Q9BX74 207 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 HIPK2Q9H2X6 1198 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 VAX2Q9UIW0 290 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 HSF4Q9ULV5 492 aa10.53□□□□□ -0.72
SHMT2-207ENST00000553837 A0A1B0GU03 582 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 NDUFS8O00217 210 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 ANGPTL7O43827 346 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 PITX3O75364 302 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF728P0DKX0 622 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF32P17041 273 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 ASCL1P50553 236 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 EIF3IQ13347 325 aaKnown RBP10.52□□□□□ -0.72
SHMT2-207ENST00000553837 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.72
SHMT2-207ENST00000553837 C6orf15Q6UXA7 325 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-207ENST00000553837 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 MRGPRDQ8TDS7 321 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 RTN4IP1Q8WWV3 396 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-207ENST00000553837 SPTSSAQ969W0 71 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.72
SHMT2-207ENST00000553837 ELL3Q9HB65 397 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-207ENST00000553837 GPR179Q6PRD1 2367 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 GJE1A6NN92 205 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 DHRS7CA6NNS2 312 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 ZNHIT1O43257 154 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 SPRY1O43609 319 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-207ENST00000553837 PSG4Q00888 419 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 KRTAP27-1Q3LI81 207 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 SPINK14Q6IE38 97 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 AAED1Q7RTV5 226 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 OR1F12Q8NHA8 337 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 KCNE4Q8WWG9 221 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 REEP6Q96HR9 211 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 PLEKHF2Q9H8W4 249 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 P4HTMQ9NXG6 502 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 LRFN1Q9P244 771 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 ANXA10Q9UJ72 324 aa10.52□□□□□ -0.73
SHMT2-207ENST00000553837 OR6C6A6NF89 314 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF732B4DXR9 585 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 DNPH1O43598 174 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 NXPH2O95156 264 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 IGHEP01854 428 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 CST2P09228 141 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 CEACAM16Q2WEN9 425 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 ETFRF1Q6IPR1 90 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 OR2V1Q8NHB1 315 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 Q96M66 194 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 SPRY4Q9C004 299 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 ARID1AO14497 2285 aa10.51□□□□□ -0.73
SHMT2-207ENST00000553837 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 FAM24AA6NFZ4 105 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 C9orf172C9J069 976 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 GFRA1P56159 465 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 MTCP1P56278 107 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 HERPUD1Q15011 391 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 IQCJQ1A5X6 159 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 OR4D5Q8NGN0 318 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 CPT1CQ8TCG5 803 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 TOMM40LQ969M1 308 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 ACY3Q96HD9 319 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 SYT3Q9BQG1 590 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 HES7Q9BYE0 225 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 FOXJ2Q9P0K8 574 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 SLC7A11Q9UPY5 501 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 XKRY2A2RUG3 117 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 K7EP13 123 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 LCATP04180 440 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 SERPINA7P05543 415 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 CELA3AP09093 270 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 TMEM225BP0DP42 221 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 GDF1P27539 372 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 CD82P27701 267 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 CCKARP32238 428 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 RAB11AP62491 216 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 COL10A1Q03692 680 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 SLC25A24Q6NUK1 477 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 ARRDC1-AS1Q9H2J1 176 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 LPAR2Q9HBW0 351 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 GPR35Q9HC97 309 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 PLEKHJ1Q9NW61 149 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
SHMT2-207ENST00000553837 IGKV1-12A0A0C4DH73 117 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 SIAH2O43255 324 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 IGKV1D-12P01611 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms