RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 IFT81Q8WYA0 676 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 CMTM3Q96MX0 182 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 GGTLC1Q9BX51 225 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 ALX4Q9H161 411 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-223ENST00000553686 KRT84Q9NSB2 600 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 CENPMQ9NSP4 180 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 ERGIC3Q9Y282 383 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 POLDIP2Q9Y2S7 368 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 FBXO7Q9Y3I1 522 aa4.32□□□□□ -1.72
ATXN3-223ENST00000553686 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-223ENST00000553686 TRGV10A0A0A0MS01 117 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 FUOMA2VDF0 154 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 OR5B21A6NL26 309 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 M0R2N4 97 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 MMP23AO75900 390 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 NDUFB2O95178 105 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 RENP00797 406 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 TSHBP01222 138 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 GPX2P18283 190 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 SLC6A6P31641 620 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 POLR2JP52435 117 aaKnown RBP4.31□□□□□ -1.72
ATXN3-223ENST00000553686 GRB2P62993 217 aaKnown RBP4.31□□□□□ -1.72
ATXN3-223ENST00000553686 CEACAM21Q3KPI0 293 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 LCN1P1Q5VSP4 162 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 SLX4IPQ5VYV7 408 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 BAIAP2L2Q6UXY1 529 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF573Q86YE8 665 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 ZDHHC21Q8IVQ6 265 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 OR4D6Q8NGJ1 314 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 OR9G4Q8NGQ1 327 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 OR9G1Q8NH87 305 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 HAVCR2Q8TDQ0 301 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 TMEM190Q8WZ59 177 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 ITFG2Q969R8 447 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 TSSK2Q96PF2 358 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 TAS2R3Q9NYW6 316 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 SH3GLB1Q9Y371 365 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 IER3IP1Q9Y5U9 82 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 GMEB1Q9Y692 573 aa4.31□□□□□ -1.72
ATXN3-223ENST00000553686 KIAA2026Q5HYC2 2103 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 A0A087X0M5 115 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 A0A1B0GX30 115 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 C11orf94C9JXX5 98 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 DCTN6O00399 190 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 UBE2CO00762 179 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 MAGEB3O15480 346 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 RIPK2O43353 540 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF737O75373 536 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 TXNDC12O95881 172 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 GAPDHP04406 335 aaKnown RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 HSD11B1P28845 292 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 CD40LGP29965 261 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 ERP29P30040 261 aaKnown RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 PRKCDQ05655 676 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 APOFQ13790 326 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 KLF5Q13887 457 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 GRK1Q15835 563 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 DPY19L2P2Q6ZN68 376 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 TCF23Q7RTU1 214 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 SLC16A13Q7RTY0 426 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 DCXRQ7Z4W1 244 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 MOB3BQ86TA1 216 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 NRMQ8IXM6 262 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF781Q8N8C0 355 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 OR13C2Q8NGS9 318 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 HPSE2Q8WWQ2 592 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 S1PR3Q99500 378 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 NIPAL2Q9H841 368 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF286AQ9HBT8 521 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 FBXL17Q9UF56 701 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF107Q9UII5 783 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 SLC7A11Q9UPY5 501 aa4.3□□□□□ -1.72
ATXN3-223ENST00000553686 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
ATXN3-223ENST00000553686 PKD1P98161 4303 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 TRAV41A0A0B4J266 112 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 MSGN1A6NI15 193 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF878C9JN71 531 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 G3V318 75 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 J3QT63 122 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 MOSP00540 346 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 CD7P09564 240 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 P0DMU3 169 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 GABRR1P24046 479 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 ARL3P36405 182 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 HAAOP46952 286 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 CX3CR1P49238 355 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 APOC4P55056 127 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 ABCE1P61221 599 aaKnown RBP4.29□□□□□ -1.72
ATXN3-223ENST00000553686 FCN2Q15485 313 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 CYP51A1Q16850 503 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms