RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SIGIRRQ6IA17 410 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 CD200R1LQ6Q8B3 271 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-204ENST00000553324 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 PRSS22Q9GZN4 317 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 NDUFB11Q9NX14 153 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 V9GY05 133 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 FBN3Q75N90 2809 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 UBE2QL1A1L167 161 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 CHST1O43916 411 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 QRFPP83859 136 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 SSX1Q16384 188 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 THNSL2Q86YJ6 484 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 TOMM40LQ969M1 308 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 RIMS4Q9H426 269 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-204ENST00000553324 LIN7BQ9HAP6 207 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
SHMT2-204ENST00000553324 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 GFOD1Q9NXC2 390 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
SHMT2-204ENST00000553324 MYL9P24844 172 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 IL3RAP26951 378 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 CHATP28329 748 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 NKAPLQ5M9Q1 402 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 OR8H3Q8N146 312 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 Q8N2B8 174 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 LINC00311Q8N616 119 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 OCSTAMPQ9BR26 566 aa12.32□□□□□ -0.44
SHMT2-204ENST00000553324 C12orf77C9JDV5 145 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 M0QZ24 198 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 M0QZK8 103 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 IGHV3-7P01780 117 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 HBZP02008 142 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 GAPDHP04406 335 aaKnown RBP12.31□□□□□ -0.44
SHMT2-204ENST00000553324 LPLP06858 475 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-204ENST00000553324 PSMB9P28065 219 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-204ENST00000553324 GNG10P50151 68 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 EFNB2P52799 333 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 LOXL3P58215 753 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 UNC119Q13432 240 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 ZNF773Q6PK81 442 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 Q6ZTK2 550 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 FAM89BQ8N5H3 189 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
SHMT2-204ENST00000553324 GFI1Q99684 422 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 FAAP24Q9BTP7 215 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 TAF9BQ9HBM6 251 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 GNG12Q9UBI6 72 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
SHMT2-204ENST00000553324 PEX14O75381 377 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 OR2F2O95006 317 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-204ENST00000553324 HTD2P86397 168 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 P2RY14Q15391 338 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 UTF1Q5T230 341 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 C6orf201Q7Z4U5 140 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 OR51D1Q8NGF3 324 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
SHMT2-204ENST00000553324 GALMQ96C23 342 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 LPAR5Q9H1C0 372 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 ABRACLQ9P1F3 81 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 HSF4Q9ULV5 492 aa12.3□□□□□ -0.44
SHMT2-204ENST00000553324 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 RGS11O94810 467 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 RAB3BP20337 219 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 FGF9P31371 208 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-204ENST00000553324 KRTAP10-3P60369 221 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 SRSF4Q08170 494 aaKnown RBP12.29□□□□□ -0.44
SHMT2-204ENST00000553324 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-204ENST00000553324 HERPUD1Q15011 391 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 ARSJQ5FYB0 599 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-204ENST00000553324 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 SULT4A1Q9BR01 284 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 NICN1Q9BSH3 213 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 SLC25A33Q9BSK2 321 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 ZNF702PQ9H963 129 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
SHMT2-204ENST00000553324 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 TXNL1O43396 289 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 CD24P25063 80 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 BLCAPP62952 87 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 LY6G6FQ5SQ64 297 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 C22orf42Q6IC83 251 aa12.28□□□□□ -0.44
SHMT2-204ENST00000553324 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms