RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TINCRA0A1B0GVN0 87 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 METTL15A6NJ78 407 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 STX10O60499 249 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 GPR75O95800 540 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 PSKH1P11801 424 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 CD99P14209 185 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 EVI2BP34910 448 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 SMAGPQ0VAQ4 97 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 C1DQ13901 141 aaKnown RBP2.77□□□□□ -1.97
SCFD1-209ENST00000553280 HES3Q5TGS1 186 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF680Q8NEM1 530 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 SPPL2BQ8TCT7 592 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 KCTD4Q8WVF5 259 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 GALMQ96C23 342 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 KCTD7Q96MP8 289 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 OR2V2Q96R30 315 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 DHRS9Q9BPW9 319 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 TSSK6Q9BXA6 273 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 POTEKPQ9BYX7 375 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 OR2D2Q9H210 308 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 V9GYY5 206 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-209ENST00000553280 SCN4AP35499 1836 aa2.77□□□□□ -1.97
SCFD1-209ENST00000553280 KIF26AQ9ULI4 1882 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-209ENST00000553280 ARGFXA6NJG6 315 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 DEXIO95424 95 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 GYPCP04921 128 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 INAFM2P0DMQ5 153 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 UGT2B7P16662 529 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 RPS11P62280 158 aaKnown RBP eCLIP2.76□□□□□ -1.97
SCFD1-209ENST00000553280 CCDC122Q5T0U0 273 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 Q6ZQT7 251 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 TCF23Q7RTU1 214 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 ZBTB8OSQ8IWT0 167 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 OR1P1Q8NH06 330 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 OR4A5Q8NH83 315 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 TNFAIP8L1Q8WVP5 186 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 ARL6Q9H0F7 186 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 MS4A6AQ9H2W1 248 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 UBAP1Q9NZ09 502 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF492Q9P255 531 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 GLS2Q9UI32 602 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 ADGRL1O94910 1474 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 TRIP11Q15643 1979 aa2.76□□□□□ -1.97
SCFD1-209ENST00000553280 MYO3BQ8WXR4 1341 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 AZIN1O14977 448 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 ARL6IP5O75915 188 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 C8orf88P0DMB2 117 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 IFNGR2P38484 337 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 CD79BP40259 229 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SULT1A2P50226 295 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 PDZD11Q5EBL8 140 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SPATA31B1PQ5VZV4 182 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 CPNE9Q8IYJ1 553 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 C1orf64Q8NEQ6 169 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 BPIFB6Q8NFQ5 453 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SLC37A2Q8TED4 501 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SPZ1Q9BXG8 430 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SNX10Q9Y5X0 201 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 SSH2Q76I76 1423 aa2.75□□□□□ -1.97
SCFD1-209ENST00000553280 A0A1W2PQ67 120 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 B4DEV8 164 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 H3BMM0 161 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 SLC16A4O15374 487 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 AHSA1O95433 338 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 IGHV3-53P01767 116 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 APOEP02649 317 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 PSMA1P25786 263 aaKnown RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 MIPP30301 263 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 H2BFSP57053 126 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 MAGOHP61326 146 aaKnown RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 FLI1Q01543 452 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 MLLT11Q13015 90 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 IL15RAQ13261 267 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 IGFBP7Q16270 282 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 TRMT12Q53H54 448 aaKnown RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 EBLN2Q6P2I7 272 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 CYHR1Q6ZMK1 362 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 PAGE2Q7Z2X7 111 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 Q8N402 240 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 NATD1Q8N6N6 113 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 CYGBQ8WWM9 190 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 ASB13Q8WXK3 278 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 APOBEC3DQ96AK3 386 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 UBE2WQ96B02 151 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 TRIB3Q96RU7 358 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 MROQ9BYG7 248 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 GTSF1LQ9H1H1 148 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 C11orf49Q9H6J7 331 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 TAS2R1Q9NYW7 299 aa2.74□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF230Q9UIE0 474 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-209ENST00000553280 F5H5T6 163 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 H3BSA7 217 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 SSNA1O43805 119 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-209ENST00000553280 KLHL2O95198 593 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms