RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RCC1P18754 421 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-227ENST00000553256 CD24P25063 80 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 RBM39Q14498 530 aaKnown RBP15.42■□□□□ 0.06
PTCH1-227ENST00000553256 Q3ZCU0 254 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 SYT6Q5T7P8 510 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-227ENST00000553256 C5orf24Q7Z6I8 188 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 OR4C13Q8NGP0 309 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 UBALD1Q8TB05 177 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 ARL11Q969Q4 196 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 SULT4A1Q9BR01 284 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 NICN1Q9BSH3 213 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 YTHDF1Q9BYJ9 559 aaKnown RBP15.42■□□□□ 0.06
PTCH1-227ENST00000553256 WNT10AQ9GZT5 417 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 LPAR5Q9H1C0 372 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 ABCB10Q9NRK6 738 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 PITPNC1Q9UKF7 332 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 AK6Q9Y3D8 172 aaKnown RBP15.42■□□□□ 0.06
PTCH1-227ENST00000553256 TOR1AO14656 332 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 ARL6IP5O75915 188 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 ZNF134P52741 427 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 ZNF880Q6PDB4 577 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 C11orf88Q6PI97 169 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 OR4K15Q8NH41 348 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 KCNG3Q8TAE7 436 aa15.41■□□□□ 0.06
PTCH1-227ENST00000553256 RRP15Q9Y3B9 282 aaKnown RBP15.41■□□□□ 0.06
PTCH1-227ENST00000553256 TRDV1A0A1B0GX56 115 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 A0A1W2PPE3 182 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 NAPSAO96009 420 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 GALP22466 123 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 CALRP27797 417 aaKnown RBP15.4■□□□□ 0.06
PTCH1-227ENST00000553256 CEACAM3P40198 252 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 TMEM50BP56557 158 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 LTC4SQ16873 150 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 OR2W3Q7Z3T1 314 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 ZNF554Q86TJ5 538 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 NR2C2APQ86WQ0 139 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 THNSL2Q86YJ6 484 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 OCSTAMPQ9BR26 566 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 TMEM59Q9BXS4 323 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 LIN7BQ9HAP6 207 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 LRRC42Q9Y546 428 aa15.4■□□□□ 0.06
PTCH1-227ENST00000553256 TRAV1-2A0A0B4J238 106 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 UBE2QL1A1L167 161 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 SLC31A2O15432 143 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 HBZP02008 142 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 ZNF137PP52743 207 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 ZNF816Q0VGE8 651 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-227ENST00000553256 PLA2G7Q13093 441 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 C16orf82Q7Z2V1 217 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 C6orf201Q7Z4U5 140 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 OR1L1Q8NH94 360 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 NEK7Q8TDX7 302 aa15.39■□□□□ 0.05
PTCH1-227ENST00000553256 RBM14Q96PK6 669 aaKnown RBP15.39■□□□□ 0.05
PTCH1-227ENST00000553256 H3BUI4 141 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 TIMM23O14925 209 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 OR2F2O95006 317 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 GNG10P50151 68 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 MADCAM1Q13477 382 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 EBI3Q14213 229 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 P2RY14Q15391 338 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 TMEM30BQ3MIR4 351 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 CCDC144NLQ6NUI1 221 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 SLC25A48Q6ZT89 311 aaKnown RBP15.38■□□□□ 0.05
PTCH1-227ENST00000553256 KLHDC1Q8N7A1 406 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 OR2T6Q8NHC8 308 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 FAAP24Q9BTP7 215 aa15.38■□□□□ 0.05
PTCH1-227ENST00000553256 AMMECR1Q9Y4X0 333 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-227ENST00000553256 TRBV6-6A0A0A6YYG2 114 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 IGHV3-43A0A0B4J1X8 118 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 SDCBPO00560 298 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-227ENST00000553256 SOCS1O15524 211 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 IGHV3-43DP0DP04 118 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 ARSBP15848 533 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 BRS3P32247 399 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 CLDN12P56749 244 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 HERPUD1Q15011 391 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 HMGN3Q15651 99 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 CT45A1Q5HYN5 189 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 C6orf183Q5T699 404 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 TREML4Q6UXN2 200 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 OR51D1Q8NGF3 324 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 CT45A3Q8NHU0 189 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 Q9H521 79 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 TAF9BQ9HBM6 251 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 TRAPPC2LQ9UL33 140 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 V9GY05 133 aa15.37■□□□□ 0.05
PTCH1-227ENST00000553256 CCRL2O00421 344 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 FGF9P31371 208 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-227ENST00000553256 RAB7AP51149 207 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 OR10A3P58181 314 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 C2orf76Q3KRA6 126 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 NKAPLQ5M9Q1 402 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 LY6G6FQ5SQ64 297 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 HIST2H2BDQ6DRA6 164 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 TRAT1Q6PIZ9 186 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 ZNF773Q6PK81 442 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 OR8H3Q8N146 312 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 SVOPQ8N4V2 548 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 DRAM1Q8N682 238 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 Q8N6K4 173 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms