RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 BARHL1Q9BZE3 327 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 BANF2Q9H503 90 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 SSR3Q9UNL2 185 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 A0A1B0GVG6 124 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 TCRBV4S1A1TA0A5B7 111 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 H3BMQ9 156 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 SLC17A2O00624 439 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 HSPB6O14558 160 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 SLC22A1O15245 554 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 BPNT1O95861 308 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 MGMTP16455 207 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 CD36P16671 472 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 FGF9P31371 208 aaPredicted RBP9.44□□□□□ -0.9
CKAP4-202ENST00000552828 KCNJ3P48549 501 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 ATXN7L3Q14CW9 347 aaPredicted RBP9.44□□□□□ -0.9
CKAP4-202ENST00000552828 KRBOX4Q5JUW0 171 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 ATAD3CQ5T2N8 411 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 C22orf42Q6IC83 251 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 SUMF2Q8NBJ7 301 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 TMEM104Q8NE00 496 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 KCNG3Q8TAE7 436 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 NDNFQ8TB73 568 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 RAB2BQ8WUD1 216 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 GFI1Q99684 422 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 DPCDQ9BVM2 203 aaPredicted RBP9.44□□□□□ -0.9
CKAP4-202ENST00000552828 SELENOIQ9C0D9 397 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 SPACA1Q9HBV2 294 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 TXNL4BQ9NX01 149 aaKnown RBP9.44□□□□□ -0.9
CKAP4-202ENST00000552828 DPM3Q9P2X0 92 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 UBE2J1Q9Y385 318 aaPredicted RBP9.44□□□□□ -0.9
CKAP4-202ENST00000552828 V9GY05 133 aa9.44□□□□□ -0.9
CKAP4-202ENST00000552828 TRGV10A0A0A0MS01 117 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 WI2-2373I1.2A0A1W2PRP0 233 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 ODAMA1E959 279 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A10PA6NDY2 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A18PA6NE21 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A16PA6NEW6 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A20PA6NIJ5 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A7PA6NKC0 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A12PA8MX19 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A5PA8MXJ8 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A23PA8MXZ1 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 MMP23AO75900 390 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 OR2F2O95006 317 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 PF4P02776 101 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 AMY1AP04745 511 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 AMY2AP04746 511 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A15PP0C7V4 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A13PP0C7W8 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A14PP0C7W9 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM90A24PP0C7X0 464 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 VSIG8P0DPA2 414 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 ARSBP15848 533 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 BRS3P32247 399 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 GLIPR1P48060 266 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 RAB11BQ15907 218 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 C11orf87Q6NUJ2 197 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 LINC00299Q6ZSB3 139 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 TRAPPC6BQ86SZ2 158 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 ABHD12Q8N2K0 398 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 OR4X2Q8NGF9 303 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 FAM46BQ96A09 425 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 COQ2Q96H96 371 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 RBM14Q96PK6 669 aaKnown RBP9.43□□□□□ -0.9
CKAP4-202ENST00000552828 NCOR1P1Q9H4R4 102 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 ING3Q9NXR8 418 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 OR6C3Q9NZP0 311 aa9.43□□□□□ -0.9
CKAP4-202ENST00000552828 MEIKINA0A087WXM9 373 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 LEUTXA8MZ59 168 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 LPLP06858 475 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 RAB3BP20337 219 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 CD24P25063 80 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 CD34P28906 385 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 PAX5Q02548 391 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 RBM39Q14498 530 aaKnown RBP9.42□□□□□ -0.9
CKAP4-202ENST00000552828 P2RY14Q15391 338 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 ABCA11PQ4W5N1 156 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 GPR107Q5VW38 600 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 OR52W1Q6IF63 320 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 OR10K2Q6IF99 312 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 HEPN1Q6WQI6 88 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 LINC00482Q8N8I6 264 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 ZNF565Q8N9K5 539 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 DRAXINQ8NBI3 349 aaPredicted RBP9.42□□□□□ -0.9
CKAP4-202ENST00000552828 ZNF596Q8TC21 504 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 NEK7Q8TDX7 302 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 CORO2AQ92828 525 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 BORCS5Q969J3 196 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 Q96M66 194 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 KCTD7Q96MP8 289 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 CHCHD6Q9BRQ6 235 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 SLC25A33Q9BSK2 321 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 TMEM59Q9BXS4 323 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 OR51E2Q9H255 320 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 GAL3ST2Q9H3Q3 398 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms