RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 MYF6P23409 242 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 GYS2P54840 703 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 Q8N1Y9 231 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 CCDC107Q8WV48 283 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 ARPC1AQ92747 370 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 TPSG1Q9NRR2 321 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
CACNB3-222ENST00000552465 A8MZ25 164 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 J3QLW9 94 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 HTR3BO95264 441 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 OR8U9P0C7N5 309 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 ZNF19P17023 458 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 ZNF134P52741 427 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 MMDQ15546 238 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 SATL1Q86VE3 508 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 MINDY2Q8NBR6 621 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 ZNF439Q8NDP4 499 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-222ENST00000552465 GPER1Q99527 375 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 CIB1Q99828 191 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 TOLLIPQ9H0E2 274 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 RIBC2Q9H4K1 309 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 PARP11Q9NR21 331 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 POMPQ9Y244 141 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 ST3GAL6Q9Y274 331 aa13.03□□□□□ -0.32
CACNB3-222ENST00000552465 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.32
CACNB3-222ENST00000552465 IGHV7-81A0A0B4J1V7 117 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 OR7C1O76099 320 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-222ENST00000552465 HLA-DRB1P01911 266 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 MT-ND4P03905 459 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 RAB3AP20336 220 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 LSAMPQ13449 338 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 CT45A1Q5HYN5 189 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 LYPD6Q86Y78 171 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 CT45A3Q8NHU0 189 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 RITA1Q96K30 269 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 OR4C12Q96R67 309 aa13.02□□□□□ -0.33
CACNB3-222ENST00000552465 IGHV4OR15-8A0A075B7B6 117 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 A0A087WW49 117 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 MAGEB3O15480 346 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 LANCL1O43813 399 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 JTBO76095 146 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 CDRT1O95170 752 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 RPSAP08865 295 aaKnown RBP13.01□□□□□ -0.33
CACNB3-222ENST00000552465 BLVRBP30043 206 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-222ENST00000552465 ACTBP60709 375 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 NHLRC3Q5JS37 347 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 ZNF529Q6P280 563 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 OR51A2Q8NGJ7 313 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 SPATA25Q9BR10 227 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 FAM192AQ9GZU8 254 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 DHDHQ9UQ10 334 aa13.01□□□□□ -0.33
CACNB3-222ENST00000552465 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
CACNB3-222ENST00000552465 GEMIN2O14893 280 aaKnown RBP13□□□□□ -0.33
CACNB3-222ENST00000552465 LGALS1P09382 135 aaKnown RBP13□□□□□ -0.33
CACNB3-222ENST00000552465 CNTFRP26992 372 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 RBM11P57052 281 aaKnown RBP13□□□□□ -0.33
CACNB3-222ENST00000552465 PITPNAQ00169 270 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 LIN54Q6MZP7 749 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 SGPP2Q8IWX5 399 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 ACBD7Q8N6N7 88 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 OR52N1Q8NH53 320 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 ANKRD60Q9BZ19 345 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 GNG12Q9UBI6 72 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 ING4Q9UNL4 249 aa13□□□□□ -0.33
CACNB3-222ENST00000552465 CSMD3Q7Z407 3707 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 C12orf77C9JDV5 145 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 AIPO00170 330 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 SOX15O60248 233 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 ATAD3CQ5T2N8 411 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 STEAP3Q658P3 488 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 OR10V1Q8NGI7 309 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 NEK7Q8TDX7 302 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 TSEN15Q8WW01 171 aaKnown RBP12.99□□□□□ -0.33
CACNB3-222ENST00000552465 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
CACNB3-222ENST00000552465 ZNF251Q9BRH9 671 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 IL36GQ9NZH8 169 aa12.99□□□□□ -0.33
CACNB3-222ENST00000552465 TMEM212A6NML5 194 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 NBR2O15453 112 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 GYG2O15488 501 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 SPINT2O43291 252 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 HSPA12AO43301 675 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 HAGHQ16775 308 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 C5orf64Q2M2E5 130 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 TMEM30BQ3MIR4 351 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 DNAL1Q4LDG9 190 aa12.98□□□□□ -0.33
CACNB3-222ENST00000552465 AMIGO2Q86SJ2 522 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms